Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2637 ATGCTATCAAGATCTTGCTTGGGGCTATTGAATTTGGTATCAGTGGATGACTACCAGGCCCTGAGTCGCGTTCCGCGGGTTATGACTGTCGCCGGAGACGTGCCGGAGTTGGAGATCGACGACATGGAGAATTCTGGATCGGACGGCATCCTTTCTCCGGTGTCGCGCGAACGGAGGATTGTGGTGGCCAACCAGTTACCGATACGCGCCATTCGCGAGGGGAAGAAATGGAGGTTCGAGTGGGACAGGGATAGCCTCGTGCTTCAGCTGAAGGATGGGTTCCCTTCGGAGGTTGAAGTATTGTACGTTGGTTCATTGAAAGCAGAGATCGAAGCGACGGAACAAGAAGAAGTGTCTCAGTTACTTCTAGAGAGGTTCAGTTGCGTTCCAACGTTTTTGCCCACCGAGGTTCACAACAACTTCTACCATGGTTTCTGCAAGCATTATCTCTGGCCTCTGTTTCACTACATGTTGCCCATGTCGCCGAGCCAAGGCGCGCGTTTCGACCGAGCGCAGTGGCAGGCCTACGTGCTCGCCAACAAGATCTTCGCCGACAAGGTCACCGAGGTTATCAACCCCGACGAGGATTATGTCTGGGTCCACGATTACCACCTCATGATCTTGCCCACTTTCTTGAGGAAACGCTTTCACCGCGTGAAGCTCGGGTTCTTCTTGCACAACACATTCCCGTCGTCGGAAATATACCGTACGTTGCCCATTCGAGAGGACATTCTACGGGCGGGTTACATTGGTTTGGATTATTACGGTAGAACCGTGACCATTAAGATCCTCCCCGCGGGTATTCACATGGGGTTGTTGGAATCGGTGTTGTCGTTGCCTCAAACCGCTTCGAGGGTGAAGGAGTTGAGGGAGCAGTTTGAGGGGAAGGTTGTGATCTTGGGGATTGATGACATGGACTTGTTCAAAGGTATCAGCTTGAAGTTCTTGGCGTTGGGGCAGCTTCTGGAAGTGCACGAATGTTTAAGGGGTCGTGTGGTGTTGGTTCAGATTCTTAACGCAGCGAGGAGTAGAGGGAAGGATATTCAGGATGTGAAGAACGAGAGCGAGGCTATTGCTAAGGAGATCAATGAAAAATACGGAAAACCTGGGTACCAGCCAATTGTTTGCATCAATGGCCCCATTTCAACGCAGGAGAAGGCTGCGTATTGTGCTATTTCTGAGTGCTGTGTTGTGAATGCTGTAAGGGATGGGATGAATTTGGTGCCTTATGAGTACACTGTTTGTAGACAGGGAAGTGCTGCGTTGGACAAGGCACTTGGTATTGATGGCGAGGAGGGTTTGAGGGCTAAGAATAGCGTTATTATTGTCTCCGAGTTCATTGGGTGTTCCCCCTCGCTGAGTGGAGCCATAAGGGTGAATCCGTGGAACATTGATGAAGTCTCTGAGGCCATGAATTTGGCTATTGGAATGCCAGAGGCAGAGAAGCATTTGCGGCATGAGAAGCATTATAAGTATATAAGCTCTCATGATGTGGCGTATTGGGCAAAGAGTTTTGATCAGGATTTGGAGAGAGCTTGTAAAGAGCATTACTTGAAGAGGTATTGGGGTGTTGGCTTGGGCTTGGGGTTCAGAATTGTTGCTTTGGATCCTACCTTTAGGAAGCTTTCCGTTGATCACATTGTCTCTGCCTATAGGGATACGGGCAATCGCTTGATCCTTTTGGACTATGATGGCACAATGATGCCCCAGGCATCCATTAACAAGACTCCAAGCAGTGAGGTTATTTCTGTCTTGAATGATTTGTGCAGTGATCCCAAAAATACAGTGTTCATTGTGAGCGGCAGGGATAAGGATTGCTTGAGCAAGTGGTTTTCTCCCTGTGAGAAGCTTGGTCTCTCTGCTGAGCACGGTTACTTCACTAGGTGGAGTAAGGATTCTTCTTGGGAGACTTGCGGATTGACAACCGATTTTGAATGGAAAATGATTGCAGAACCCGTGATGGCGCTTTATACTGAAGCAACGGATGGTTCCTTCATAGAACATAAGGAAAGCGCACTGGTTTGGCACCATCAGGAAGCGGATCCTTATTTTGGATCATGCCAAGCAAAAGAGCTTCTTGATCACCTGGAGAGTGTGCTGGCCAATGAGCCAGTAGTGGTTAGAAGGGGACAGCATATAGTTGAAGTTAAACCTCAGGGTGTGAGCAAGGGTAAAGTGGTGGAAGACCTTATCTCAAGAATGCAAAGGGAGGGGAAGTCACCAGATTTTCTACTGTGCTTAGGAGATGATCGCTCGGATGAAGATATGTTTGAAAGCATTGCTCGTTCAGTTTCTAATCCAGCTCTGCCAACCATTTCAAATGTGTTTGCATGCACTGTTGGCCAGAAACCAAGTATGGCTAAATACTATTTGGATGATACTAGCGAAGTCATCAAGTTGCTTGAAGGACTTTCAACCGCATCAGCACCACCTGCATCCATAACTTCCCAGGAACTGCAAGGAACGTTATAG 2472 0.485 MLSRSCLGLLNLVSVDDYQALSRVPRVMTVAGDVPELEIDDMENSGSDGILSPVSRERRIVVANQLPIRAIREGKKWRFEWDRDSLVLQLKDGFPSEVEVLYVGSLKAEIEATEQEEVSQLLLERFSCVPTFLPTEVHNNFYHGFCKHYLWPLFHYMLPMSPSQGARFDRAQWQAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHNTFPSSEIYRTLPIREDILRAGYIGLDYYGRTVTIKILPAGIHMGLLESVLSLPQTASRVKELREQFEGKVVILGIDDMDLFKGISLKFLALGQLLEVHECLRGRVVLVQILNAARSRGKDIQDVKNESEAIAKEINEKYGKPGYQPIVCINGPISTQEKAAYCAISECCVVNAVRDGMNLVPYEYTVCRQGSAALDKALGIDGEEGLRAKNSVIIVSEFIGCSPSLSGAIRVNPWNIDEVSEAMNLAIGMPEAEKHLRHEKHYKYISSHDVAYWAKSFDQDLERACKEHYLKRYWGVGLGLGFRIVALDPTFRKLSVDHIVSAYRDTGNRLILLDYDGTMMPQASINKTPSSEVISVLNDLCSDPKNTVFIVSGRDKDCLSKWFSPCEKLGLSAEHGYFTRWSKDSSWETCGLTTDFEWKMIAEPVMALYTEATDGSFIEHKESALVWHHQEADPYFGSCQAKELLDHLESVLANEPVVVRRGQHIVEVKPQGVSKGKVVEDLISRMQREGKSPDFLLCLGDDRSDEDMFESIARSVSNPALPTISNVFACTVGQKPSMAKYYLDDTSEVIKLLEGLSTASAPPASITSQELQGTL* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2637 823 CDD GT20_TPS 58 510 IPR001830 GO:0003824|GO:0005992
Apr9g2637 823 Pfam Trehalose-phosphatase 560 795 IPR003337 GO:0003824|GO:0005992
Apr9g2637 823 Gene3D - 686 814 IPR023214 -
Apr9g2637 823 Gene3D - 556 671 IPR023214 -
Apr9g2637 823 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 58 514 - -
Apr9g2637 823 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 247 - -
Apr9g2637 823 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 247 810 - -
Apr9g2637 823 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 558 762 IPR006379 -
Apr9g2637 823 TIGRFAM T6PP: trehalose-phosphatase 557 804 IPR003337 GO:0003824|GO:0005992
Apr9g2637 823 CDD HAD_TPP 558 799 - -
Apr9g2637 823 Gene3D Glycogen Phosphorylase B; 272 494 - -
Apr9g2637 823 Pfam Glycosyltransferase family 20 58 246 IPR001830 GO:0003824|GO:0005992
Apr9g2637 823 Pfam Glycosyltransferase family 20 252 510 IPR001830 GO:0003824|GO:0005992
Apr9g2637 823 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 247 810 IPR001830 GO:0003824|GO:0005992
Apr9g2637 823 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 247 IPR001830 GO:0003824|GO:0005992
Apr9g2637 823 Gene3D Glycogen Phosphorylase B; 51 255 - -
Apr9g2637 823 SUPERFAMILY HAD-like 557 803 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2637 Apr-Chr9 33526336 33531526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2637 10 808 Trehalose Biosynthesis Gene Families AT2G18700 64.277 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2637 K16055 - gmx:100810498 1458.35