Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2622 ATGGAATATGTATCTGGAGGACCACTATTGGACAAGATGTCCTATGCTGAAAAGTTGAATGAATGTGAGGCAAGAAAACTATTCCAGCAACTTATTGATGCCTTGGACTACTGTCATGACAAAGGAATTTATCATCGAGATCTCAAGCCAGAAAACTTGCTTCTTGACAACAAGGGAAATCTCAAAGTATCTGATTTTGGATTGAGTGCATTGCAAAAACCTAATGATGTCTTAAACACGCGGTGTGGATCCCCGTGCTATGTGGCACCAGAGTTGTTATGGAGCAACAGATACGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTACTTGCAGGTTATCTACCATTTGACGACCAGAATTTGATGAGCTTATATAGAAAGATATGCAAGGCAGAATATAAATGTCCACCATGGTTTACTCAAAGTCAAAAGAAACTAATTACCAAAATACTTGAACCACATCCGGGAAAGCGGATAACTATACCAGATATTGTTGAAGATGAATGGTTTCAATTAGATTACAAGCCTGTTGATGCATCTGAACTTAATGAGGACATTAACTTGGATGATGACAATGCTGCTTTTGATTCATCAGCGATGTCTAGATCCTCAAGTTTCATTAATGCGTTTCAACTAATAGCCATGTCTCAGGACCTTGATCTGTCTGGCCTTTTTGAAGAACAGGATGAAAAAAAGAAGAGAACAAGGCTGGGATCCACACACACAATCAATGAAACCATAGAAAAAATAGAAGCTGCTGCAGCAGATGTGAGACTGACTGTAGAAAAAATGAACAACTTAAAGATAAAAATGCAACCAAAACCGATAATGACCAGGTGTTCTAGATCATACTTTGACCTATCAGCCCAGGTGATTGAAGTTGCCCCAACTCATTGTGTTATAGAAATATCAAAATCTGAAGGAGATCTAAGAATGTACTACGAATTTTGTGAAAGTCTATCAAATCTGCTGAAACAAAACCCTCGTGTGCCATCACAAAACCAAGATTCCTTATAG 1035 0.3865 MEYVSGGPLLDKMSYAEKLNECEARKLFQQLIDALDYCHDKGIYHRDLKPENLLLDNKGNLKVSDFGLSALQKPNDVLNTRCGSPCYVAPELLWSNRYDGAAADVWSCGVILFELLAGYLPFDDQNLMSLYRKICKAEYKCPPWFTQSQKKLITKILEPHPGKRITIPDIVEDEWFQLDYKPVDASELNEDINLDDDNAAFDSSAMSRSSSFINAFQLIAMSQDLDLSGLFEEQDEKKKRTRLGSTHTINETIEKIEAAAADVRLTVEKMNNLKIKMQPKPIMTRCSRSYFDLSAQVIEVAPTHCVIEISKSEGDLRMYYEFCESLSNLLKQNPRVPSQNQDSL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2622 344 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2622 344 Pfam NAF domain 211 269 IPR004041 GO:0007165
Apr9g2622 344 ProSiteProfiles NAF domain profile. 208 232 IPR018451 GO:0007165
Apr9g2622 344 CDD CIPK_C 214 332 - -
Apr9g2622 344 SUPERFAMILY Protein kinase-like (PK-like) 1 177 IPR011009 -
Apr9g2622 344 Gene3D Transferase(Phosphotransferase) domain 1 4 201 - -
Apr9g2622 344 Gene3D Kinase associated domain 1, KA1 209 333 - -
Apr9g2622 344 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 1 333 - -
Apr9g2622 344 Coils Coil 253 273 - -
Apr9g2622 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Apr9g2622 344 SMART serkin_6 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2622 344 Pfam Protein kinase domain 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2622 344 PANTHER SERINE/THREONINE KINASE 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2622 Apr-Chr9 33346542 33348758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2622 1 330 CBL-interacting serine-threonine protein kinases AT5G57630 61.934 3.63e-144 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr9g2622 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2622 - - gmx:100786097 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2622 9 33346542 33348758 Apr9g2622 9 33346542 33348758 ECH