Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2617 ATGTGTAATAAAGGGTTTCAATGCTTGAGCGAGTGTGAGAGTGTAATTGATCATCGACAACACTTCTTCATGGATAGTCCCATTCGATCGCCGGCTACCGGTTCCGGTTCCGGTTCCGGTTCGGCACCTGGTTCCAATGATGATAGCCGGCGTGTTAAGTTCTTGTGTAGCTTTCTGGGGAGCATAATGCCCCGTCCCCAAGATGGGAAGCTGCGTTATGTTGGCGGTGAGACGCGAATTGTGAGTGTTCTGAGAGATATCAGCTATGAGGAGTTGATGGTTAAGATGAGAGAGCTGTATGAAGGGGCAGCTGTGTTGAAGTACCAGCAGCCTGATGAGGATCTTGATGCTCTTGTCTCTGTTGTCAATGATGATGATGTGGTTAACATGATGGAAGAGTATGACAAGTTGGGGTCAGGGGATGGATTCACCCGGCTCAGGATTTTTTTGTTTTCGCAATCTGAGCAGGATGGTTCATCACATTTCATTGATGGGGATGATTCTGAAAGGAGGTATGTTGATGCTTTGAATAGTTTAAATGATGTTTCTGACTTTAGGAGATTGCAACAAGCTGAGTTTCCTATGATTAGCCCTGTTGAGGAGATTCATATGGCTGATCAGTACTTTAATCCAATTAGTGTGGAAAGTGGGGTTCATAGCCAGAGAAGTGGGGACCTATCTATGTCACAGTACAATATGCATCATCTCACGATCCAGCACCCGCAAAGTATAGGCCAGAGGTATAATGAAATGGATGCTCCTTGGAATCCTTCCTATTACTCTCCTAGGCATCATGGTCTTCATGACTCCAGATCGTTGGTTGAATTTCCATCTTCTCCTTCTGGCACAAGGTTTCGTATGCAGTTTCCTGAGATACTGGATAAGTCCATTGATAGAGTGCCCGAAGAGTTTGCTCGACACCACGTAAATCATCATCCAGTGTACGACAATCAACCACAATATTCTGAAAATGTTGTGTGGGTGCCAACTGGGGCACCACATGGTGAAAAATCAGGTTTTCCAGCTAATCTTCTTCATGGCCACCATGTTCTTGATGGGAACAGTATTTGTGAGCAGTGTCGCATGGGTTTTCATAGAGGTCAACCACATCTGGAGCATTCTAATATTAGTAATGGACTTCCACCGATTACTAATCCATGTGCAGAATGCCCGACAAGCAAGGATTCTTTCCCGGTGAATGCTGATGCAAAGTTACATCCTGTGATCTATCCCAATGAGCCTAGCAATGATCATAGGTCTGTTTATACTGATACTCAGAATCATGAGAGAGGATGGGGTTTGAGGCATCAGACAACTACTCGGGTTGAGGAATCAAGAGGACATGTCTCTGGATCTGGAAGAGTGGGTGATGTTCCTGTTGTAAATTTTTCTCTTGGACATGGTAGTGTGACTGATGGACATACCTTGTCTTCCAATTATGTGTATCAACGACCCAGACCTGAATCGGGAGCTGAACTATTCCCTGACCAAACCGTGACAGCTATACCACATCTAAATATGCCTCCTCTGGAAGAGCACGCTGCAAGGTATGGAAATCCACCTCCTCCTTATGTTGTGGATAATAATTATGCAGTACCTCGTGGACATCCACCTGGGCATGGTTTCTGGAGCAACACTCCTGCTCCTGTTCATATTGGACCATCTTATGAGACAATTACTCCACATCAGCAGGTGAATGGTATGATAAATGCTGCATTAATCAGGGGAGAAGGAAGTCCAGGATTTTTCATTGGACCAGATAATCAGAATCATTGGGTTGATTCATCGCAGAACTTGTCAGGACATGACGGGTCAGCCACCCCAGAAAATTTGTATGCACATGGTCTGAAGTTGAATCCCAAGCCCCTTGGTGAAGAAAATCAACTCCCAATTACTGTAGATACCATTCATCCCCCACAGGACATGAATGCAGGTACCTGCATGGAACCTGTGCAGCTGCCAAAACCATCTTTTAATATGGTTCACAATAAAGAGGTTGCAAGAAGTGATACTCAATTGACTGAAGCAATGAATTTTCAATCTAAAAGTTTGCTTGGAGGAGGAATAGAAGCAAAAAATGAGGACAAGGTTGAAAACTCTGATGCACCACAGACTATATCTTTTTCGGAGAAAAATAAAATTGCTGAGAATTCACGCGAAGCTGCTGCTCCTATTGAGTCTAATAATTCAAATTCAAAGCCTGAAGCAGAACGTGGACATGTTGAGAAACTGGCTGATAAGGACCATTCTGCTCCAGAAGATTCAAAGCAATTAGTTGATCAATTCAGCTTCTTGCCTGAGTTGATTGCTACAGTAAAAAAGGCTGCATTAGAAGGTGCTGCAGAGATGAACACCGCAGCTGATGAGCGTGCCAATTCTCAGATGCACGATTCAAATACCAAAGAAGAAACAAAAAATGATGTAGAACCAGCGAATGCTCATGGTGATATAGATTTGGACTCTGAAAATGATCACGTAGATACTTCTAAAATTGAGCCTACAAAGGCTGAGGAAGAAGCAATTGCAAGGGGACTGCAGACTATTAAAAATGATGATTTGGAGGAGATCCGTGAGCTTGGTTCTGGAACTTATGGAGCAGTTTATCATGGGAAATGGAAAGGTTCTGATGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGGCCATCTGAAAGAGCAAGATTGATTGCAGATTTCTGGAAGGAGGCATTGTTGTTGAGTTCATTGCATCATCCAAATGTTGTCTCATTTTATGGTATTGTTCGTGATGGCCCTGATGGTTCTTTGGCAACAGTCACAGAATTTATGGTTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACAATAGATCGTCGAAAGAGGCTCATTATAGCCATGGATGCTGCATTTGGGATGGAGTATTTGCATGGGAAAAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCACAGCGGCCTGTCTGCAAGATTGGTGATTTGGGTTTGTCAAAGGTTAAGCAGCACACACTAGTGTCTGGAGGGGTACGGGGAACTTTGCCATGGATGGCACCTGAACTTCTTAGTGGGAAAAGTAATATGGTGTCAGAGAAGATTGATGTTTATTCATTCGGGATAGTCATGTGGGAAGTACTCACAGGGAATGAACCCTATGCTGACATGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAACACTTTACGTCCTCAAATCCCAACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCTGATCCTGCAGAAAGGCCATCGTTCTCAGAAATTTCCAAGAAGCTGAGGACTATGGCTGCTTCAATGAATGTGAAATAG 3381 0.4324 MCNKGFQCLSECESVIDHRQHFFMDSPIRSPATGSGSGSGSAPGSNDDSRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVLRDISYEELMVKMRELYEGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSSHFIDGDDSERRYVDALNSLNDVSDFRRLQQAEFPMISPVEEIHMADQYFNPISVESGVHSQRSGDLSMSQYNMHHLTIQHPQSIGQRYNEMDAPWNPSYYSPRHHGLHDSRSLVEFPSSPSGTRFRMQFPEILDKSIDRVPEEFARHHVNHHPVYDNQPQYSENVVWVPTGAPHGEKSGFPANLLHGHHVLDGNSICEQCRMGFHRGQPHLEHSNISNGLPPITNPCAECPTSKDSFPVNADAKLHPVIYPNEPSNDHRSVYTDTQNHERGWGLRHQTTTRVEESRGHVSGSGRVGDVPVVNFSLGHGSVTDGHTLSSNYVYQRPRPESGAELFPDQTVTAIPHLNMPPLEEHAARYGNPPPPYVVDNNYAVPRGHPPGHGFWSNTPAPVHIGPSYETITPHQQVNGMINAALIRGEGSPGFFIGPDNQNHWVDSSQNLSGHDGSATPENLYAHGLKLNPKPLGEENQLPITVDTIHPPQDMNAGTCMEPVQLPKPSFNMVHNKEVARSDTQLTEAMNFQSKSLLGGGIEAKNEDKVENSDAPQTISFSEKNKIAENSREAAAPIESNNSNSKPEAERGHVEKLADKDHSAPEDSKQLVDQFSFLPELIATVKKAALEGAAEMNTAADERANSQMHDSNTKEETKNDVEPANAHGDIDLDSENDHVDTSKIEPTKAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALLLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWEVLTGNEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPAERPSFSEISKKLRTMAASMNVK* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2617 1126 SMART PB1_new 66 151 IPR000270 GO:0005515
Apr9g2617 1126 PANTHER - 28 1126 - -
Apr9g2617 1126 MobiDBLite consensus disorder prediction 733 755 - -
Apr9g2617 1126 MobiDBLite consensus disorder prediction 30 46 - -
Apr9g2617 1126 Pfam Protein tyrosine and serine/threonine kinase 854 1116 IPR001245 GO:0004672|GO:0006468
Apr9g2617 1126 CDD PB1_UP2 55 151 - -
Apr9g2617 1126 SUPERFAMILY Protein kinase-like (PK-like) 845 1114 IPR011009 -
Apr9g2617 1126 MobiDBLite consensus disorder prediction 794 838 - -
Apr9g2617 1126 Gene3D Transferase(Phosphotransferase) domain 1 940 1126 - -
Apr9g2617 1126 Pfam PB1 domain 67 152 IPR000270 GO:0005515
Apr9g2617 1126 MobiDBLite consensus disorder prediction 27 48 - -
Apr9g2617 1126 CDD STKc_MAP3K-like 859 1116 - -
Apr9g2617 1126 SUPERFAMILY CAD & PB1 domains 68 158 - -
Apr9g2617 1126 Gene3D - 70 154 - -
Apr9g2617 1126 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 28 1126 - -
Apr9g2617 1126 MobiDBLite consensus disorder prediction 715 755 - -
Apr9g2617 1126 Gene3D Phosphorylase Kinase; domain 1 839 939 - -
Apr9g2617 1126 ProSiteProfiles Protein kinase domain profile. 853 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2617 1126 SMART serkin_6 853 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2617 1126 PRINTS Tyrosine kinase catalytic domain signature 935 948 IPR001245 GO:0004672|GO:0006468
Apr9g2617 1126 PRINTS Tyrosine kinase catalytic domain signature 972 990 IPR001245 GO:0004672|GO:0006468
Apr9g2617 1126 PRINTS Tyrosine kinase catalytic domain signature 1043 1065 IPR001245 GO:0004672|GO:0006468
Apr9g2617 1126 PRINTS Tyrosine kinase catalytic domain signature 1087 1109 IPR001245 GO:0004672|GO:0006468
Apr9g2617 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 978 990 IPR008271 GO:0004672|GO:0006468
Apr9g2617 1126 MobiDBLite consensus disorder prediction 787 838 - -
Apr9g2617 1126 ProSitePatterns Protein kinases ATP-binding region signature. 859 880 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2617 Apr-Chr9 33317465 33324280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2617 46 1126 MAP Kinase Kinase Kinase AT5G57610 54.734 0.0 1069
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Apr9g2617 PK_Tyr_Ser-Thr 1.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2617 - - gmx:100779077 1868.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2617 9 33317465 33324280 Apr9g2617 9 33317465 33324280 ECH
Apr9g2617 9 33317465 33324280 Apr1g2551 1 35040950 35048844 PCT