Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2606 ATGGCACCTCTTTCAGAAGAGTTAATCTTCCGCTCCAAACTCCCCGACATACCCATCCCCACACACCTCCCTCTACACTCTTACTGCTTCCAAAACCTCTCCCAATTCCAAAACCGCCCATGCCTCATCAACGCCGATACCGGCGAAACCCTCACCTATGCCGACGTCGACCTCACCGCCCGGCGAATCGCCGCCGGCCTCAATAACATCGGCATCCGTCAGGGTGACGTCATCATGATCCTCCTCCGCAACTGTATCCAGTTCCCCCTGGCCTTCCTCGGCGCCTCCCACCGCGGCGCCGTCATCACCACCGCCAACCCCTCTTACACGCCGGCAGAGCTTGCCAAACAGATAACGGCGACGAAATCCAAACTCATCATAACGCAGGCCGCGTACGTGGAAAAAGTAAAGAGTTTCGCGGAGAACAACGACGTTACGGTGATGTGCATTGATTCGACGGAAGAAGACGACGTTATGCATTTCTCGACGTTAACTAACGCTAACGAAACGGAAGCCCCTGCCGTTAAGATAAACCCAGACGACGTCGTTGCGCTTCCGTTTTCTTCTGGCACGTCTGGGTTACCCAAAGGAGTGATGTTGACGCATAGAAACTTGGTAACGACGGTGGCGCAGTTGGTGGATGGTGAGAACCCGCACCAGTATACGCATAGGGAAGATGTGTTACTGTGTGTGTTGCCTATGTTTCATATCTATGCGCTGAATTCGATTTTGCTGTGTGGGATTCGTGCTGGTGCTGCGGTTCTGATTGTGCAGAAGTTTGAGATTACTACGCTGTTGAAGCTGATTGAGAAGCATAGGGTTACGGTTGCGTCGTTGGTGCCGCCTATCGTTTTGGAGTTGGTTAAGAATGGAGAAGCGTTTCGATACGACCTGTCGTCTATTCGCGCCGTCGTCACTGGTGCGGCACCCATGGGCGTTGAGCTTCAAGACGCTGTCAAGGCTAGATTGCCACACGCCACACTTGGACAGGGATATGGGATGACAGAAGCAGGACCACTTGCCATTAGCTTGGCATTTGCAAAAGAGCCGTTTAAGATAAAATCAGGTGCGTGTGGAACTGTTGTAAGAAACGCGGAGATGAAAATCGTGGATACAGAAACGGGTGCTTCCCTTCCAAGAAACAAAGCCGGCGAAATTTGCATAAGAGGGACAAAGGTTATGAAAGGATATCTAAATGACCCAGAGGCTACAGCGAGAACTATAGACAAAGAAGGATGGCTACACACAGGTGATATTGGTTTCATCGACGATGATGATGAACTCTTCATTGTTGATCGGTTAAAGGAACTAATCAAATACAAAGGATACCAAGTAGCTCCTGCTGAGCTCGAAGCTTTGTTGATTGCCCACCCAAGCATTTCTGATGCTGCTGTTGTACCCTTGAAGGATGAAGTTGCCGGTGAAGTTCCAGTTGCATTTGTAGTAAGATCAAATGGTTCTACGATCACCGAGGATGAAATAAAGCAATACATTTCACAACAGGTGGTATTTTACAAGAGAATCAACAGAGTTTTCTTCACCGACTCAATTCCTAAAGCAGCGTCCGGCAAAATTCTGCGGAAGGAACTAACTGCAAGACTTTCCCAAAGTTTGGTGATGGCCAGTTAG 1629 0.4948 MAPLSEELIFRSKLPDIPIPTHLPLHSYCFQNLSQFQNRPCLINADTGETLTYADVDLTARRIAAGLNNIGIRQGDVIMILLRNCIQFPLAFLGASHRGAVITTANPSYTPAELAKQITATKSKLIITQAAYVEKVKSFAENNDVTVMCIDSTEEDDVMHFSTLTNANETEAPAVKINPDDVVALPFSSGTSGLPKGVMLTHRNLVTTVAQLVDGENPHQYTHREDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLLKLIEKHRVTVASLVPPIVLELVKNGEAFRYDLSSIRAVVTGAAPMGVELQDAVKARLPHATLGQGYGMTEAGPLAISLAFAKEPFKIKSGACGTVVRNAEMKIVDTETGASLPRNKAGEICIRGTKVMKGYLNDPEATARTIDKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGYQVAPAELEALLIAHPSISDAAVVPLKDEVAGEVPVAFVVRSNGSTITEDEIKQYISQQVVFYKRINRVFFTDSIPKAASGKILRKELTARLSQSLVMAS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2606 542 Pfam AMP-binding enzyme 32 440 IPR000873 -
Apr9g2606 542 SUPERFAMILY Acetyl-CoA synthetase-like 16 535 - -
Apr9g2606 542 CDD 4CL 19 530 - -
Apr9g2606 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 534 - -
Apr9g2606 542 Gene3D - 435 539 IPR045851 -
Apr9g2606 542 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Apr9g2606 542 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 5 534 - -
Apr9g2606 542 Pfam AMP-binding enzyme C-terminal domain 449 524 IPR025110 -
Apr9g2606 542 Gene3D - 3 434 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2606 Apr-Chr9 33219716 33227812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2606 5 502 Monolignol Biosynthesis Gene Families AT1G51680 64.892 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2606 K01904 - gmx:548034 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2606 9 33219716 33227812 Apr9g2606 9 33219716 33227812 ECH