Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2605 ATGGAACAACTTCACGACGATTTCATTTTCCGTTCCAAACTTCCCCACATTTACATCCCCACTCATCTCCCCCTCCACACCTACTGCTTCCAAAACCTCTCCCAATTCAAAGACCGTCCATGCGTCATCAACGCCACCACCGCCGAAACCTTTACCTACGCCACCGTAGAACTCACCGCCCGAAAAGTCGCCGCCGGACTCAACAAACTCGGCATCGCACAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCCCCAATTCGTATTCGCATTCCTCGGCGCCTCCTATCGGGGCGCCATCATCACCACGGCAAACCCCTTCTACACCCCGGCGGAGGTAGCCAAACAAGCCACGGCGTCGAAATCCAAACTAATCATAACGCAAGCGTCCTACGTGGACAAAGTGAAGGATTTCGCGAGAGACAATGACGTTAGAGTGATGTGCATTGACACGGCGCCGGAAGGTTACTTGCACTTCTCGGAGTTAACGGAGGCTGACGAGGGCGAAATCCCGGCAGTTAAAATATCCCCAGACGACGTCGTTGCACTGCCGTATTCGTCTGGGACCACGGGACTTCCGAAGGGGGTGATGCTGACGCACGAGGGGTTAGTTACGAGCGTGGCGCAACAGGTTGACGGAGAGAATCCGAACCTGTGGCTCGGGAGCGAGGATGTGGTAATGTGCGTGCTCCCACTTTTCCATATTTATTCGCTTAACTCGGTTTTGCTGTGTGGGCTTCGAGTTGGGGCTGCCATTTTGATCGTGCAGAAATTTGAGATCGTTACGTTGCTGGAGTTGATCCAGAAACACAAGGTGAGTGTTGCCCCGCTTGTTCCCCCCATCGTTTTGTCCATTGCTAAGAGCCCCCATGTGGAGCGATATGACCTGTCGTCTATTCGAATGCTCATGTCCGGTGCTGCACCCTTGGGAAAAGAACTTGAGGACTCTGTTAGGACTAAGCTTCCTAACGCCACCCTCGGACAGGGTTACGGTATGACAGAAGCAGGACCCGTACTTTCAATGAGCTTAGCATTTGCGAAGGAGCCGTTGCAGGTGAAATCAGGTGCGTGCGGGACCGTCGTAAGGAATGCGGAGATGAAGATCGTTGACCCTCAATCCGGCGCTTCACTTCCCAGGAATCAAGCCGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGCTATCTAAATGACGAAGAGGCCACAGAAAGAACTATAGACAAACGAGGATGGTTGCACACTGGTGATATTGGTTACATTGACGATGATGATGAGCTTTTCATCGTGGATCGGTTGAAGGAGCTGATCAAATACAAAGGATTTCAAGTGGCTCCAGCTGAGCTCGAAGCCATGCTAATTGCTCACCCAAACATTTCTGATGCTGCTGTTGTATCCATGAAAGATGAAGTCGCTGGAGAGGTTCCAGTCGCATTTGTTGTACGATCGAACGGTTCTAAGATATCCGAGGATGAAATCAAGCAATACATCTCAAAGCATGTTGTGTTTTACAAAAGAATCAATAGGGTTTTCTTTGTGGGCTCAATTCCAAAGTCTCCCTCGGGAAAGATCTTGCGGAAAGACCTCAGAGAAAGGCTTGCGGCCGGGCTTCCGGTTTAG 1623 0.5126 MEQLHDDFIFRSKLPHIYIPTHLPLHTYCFQNLSQFKDRPCVINATTAETFTYATVELTARKVAAGLNKLGIAQGDVILLLLQNCPQFVFAFLGASYRGAIITTANPFYTPAEVAKQATASKSKLIITQASYVDKVKDFARDNDVRVMCIDTAPEGYLHFSELTEADEGEIPAVKISPDDVVALPYSSGTTGLPKGVMLTHEGLVTSVAQQVDGENPNLWLGSEDVVMCVLPLFHIYSLNSVLLCGLRVGAAILIVQKFEIVTLLELIQKHKVSVAPLVPPIVLSIAKSPHVERYDLSSIRMLMSGAAPLGKELEDSVRTKLPNATLGQGYGMTEAGPVLSMSLAFAKEPLQVKSGACGTVVRNAEMKIVDPQSGASLPRNQAGEICIRGNQIMKGYLNDEEATERTIDKRGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVSMKDEVAGEVPVAFVVRSNGSKISEDEIKQYISKHVVFYKRINRVFFVGSIPKSPSGKILRKDLRERLAAGLPV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2605 540 SUPERFAMILY Acetyl-CoA synthetase-like 11 536 - -
Apr9g2605 540 CDD 4CL 19 530 - -
Apr9g2605 540 ProSitePatterns Putative AMP-binding domain signature. 184 195 IPR020845 -
Apr9g2605 540 Pfam AMP-binding enzyme C-terminal domain 449 524 IPR025110 -
Apr9g2605 540 Gene3D - 435 536 IPR045851 -
Apr9g2605 540 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 5 534 - -
Apr9g2605 540 Gene3D - 2 434 IPR042099 -
Apr9g2605 540 Pfam AMP-binding enzyme 31 440 IPR000873 -
Apr9g2605 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2605 Apr-Chr9 33212913 33216514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2605 5 502 Monolignol Biosynthesis Gene Families AT1G51680 70.611 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2605 K01904 - gmx:100779668 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2605 9 33212913 33216514 Apr9g2605 9 33212913 33216514 ECH