Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2599 ATGGATCCTGATGAGGAGTGCTCAATTGTTCTTGAATTATCTGAAAGTGATCCTTTCTTTGACAAAAAGAAGAAATTACTACAAAGTAAGGGCTTTAGTCCCAAAGAACGGATATATCTCAGGAGCTCCTCAAAACCTGGCTGGATGAATGCTACTGTAGAGTTGTTACTTCAGATTGCACGAATCATACAATTAAATGAGCTGGAACTTTATTTTGCTGAAGATGATGCATGCACGTCTGTGGAGTTTTACAGTCCCAGGAATGAGTTGGAGGCTCTCAATTCTATTATTTTGCTTGCTGACATATCACTTTCTACTTGTACACATCTCCAAACAAAAATGCTACAAGGGTTACGCCAAACAATTCTTGATTTGATTTCTGATTTTGGAGACAAAAACAGTATGAAGGGAGTAATTGAAAAAGACCGCAGTTGTGATCAAGAAGAACGCTTGATAGAATGGGGTGAAAGCAATGGTGTAATGACACAGTTAAAAATAGCTTATATTGAAGGTTCTGGTCGGGGTGCAATAGCAAGAAAAGATCTAAATGTTGGAGACACTGCTTTAGAAATACCTGTGTCCATTATCATTTCTGAAGAGCTTGTGCATGAAACTGATATGTATGATGTCTTAAAAGAGATTGATGGCATATCACCTGAGACAATATTGCTATTATGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAAATTTACTTTGACACACTCCCAGAAAAATTTAATACAGCATTGAGTTTTAGCATCGAAGCAATTACAATGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCACGACAGCACCTGCATGCTCAATATGATGAGTTGTTCCCTGTTCTGTGCAATGATTTTCCTGATATATTTCCACCAGAGCTGTACACATGGGAGAAATTTTTATGGGCTTGTGAACTCTGGTACTCTAATAGCATGAAGATAATGTATTCTGATGGAAAGCTGAGAACGTGTTTGATACCTATTGCTGGTTTTCTTAATCATTCCCTGTGCCCACATGTTATGCACTATGGCAAAGTGGATCCTGCGACAACTTCACTAAAATTTTGTCTATCAAGGCCATGCAGATCTGGAGAAGAATGCTGCTTAAGCTACGGGAACTTCTCCAGCTCTCATTTAATCACCTTTTATGGTTTCTTACCACAAGGAGACAACCTGTATGATGTCATTCCGTTAGACATTGATGGTTCTGATGTTGATTCTATTGTGGATATGCCCGTCTCCAACTGGACGACTCACATGGTGCGTGGTACTTGGCTCTCCAAGAATCACAGCCCATTCTCCTATGGCCTTCCCTCTCCATTATTGGACCATCTTCGGAAATCTCGAAGTCCCACGCTGCAGACGAAGACTTTTTTGCAAGGAAACTTGGAAAATGAGCTGGAAATTCTTGAAAATCTCAAATATATCTTTGATGACATTGTGGACAATATGGGCGACATCGATTTCGATAACAGTTGGGATGAAAAATTGGGTATGGATTTTAAAAATCTACAAAGACGAATTGCCGGTTCTGTTTCATCTTCGTGTCACACTGGTATGGACATGCTGAAGAGTGAACTGTGCAAGTGCATGGCTGAGGACATCCGAGGCTAA 1638 0.3968 MDPDEECSIVLELSESDPFFDKKKKLLQSKGFSPKERIYLRSSSKPGWMNATVELLLQIARIIQLNELELYFAEDDACTSVEFYSPRNELEALNSIILLADISLSTCTHLQTKMLQGLRQTILDLISDFGDKNSMKGVIEKDRSCDQEERLIEWGESNGVMTQLKIAYIEGSGRGAIARKDLNVGDTALEIPVSIIISEELVHETDMYDVLKEIDGISPETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTALSFSIEAITMLDGTLLLEEIMQARQHLHAQYDELFPVLCNDFPDIFPPELYTWEKFLWACELWYSNSMKIMYSDGKLRTCLIPIAGFLNHSLCPHVMHYGKVDPATTSLKFCLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNLYDVIPLDIDGSDVDSIVDMPVSNWTTHMVRGTWLSKNHSPFSYGLPSPLLDHLRKSRSPTLQTKTFLQGNLENELEILENLKYIFDDIVDNMGDIDFDNSWDEKLGMDFKNLQRRIAGSVSSSCHTGMDMLKSELCKCMAEDIRG* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2599 545 CDD SET_LSMT 164 394 - -
Apr9g2599 545 Gene3D - 2 127 IPR036464 -
Apr9g2599 545 Gene3D set domain protein methyltransferase, domain 1 145 394 - -
Apr9g2599 545 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 541 - -
Apr9g2599 545 ProSiteProfiles SET domain profile. 162 380 IPR001214 GO:0005515
Apr9g2599 545 Pfam SET domain 173 380 IPR001214 GO:0005515
Apr9g2599 545 Pfam Rubisco LSMT substrate-binding 15 101 IPR015353 -
Apr9g2599 545 PANTHER BNAA07G01600D PROTEIN 3 541 - -
Apr9g2599 545 SUPERFAMILY SET domain 148 401 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr9g2599 SET 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2599 K19199 - gmx:100778605 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2599 9 33163276 33171512 Apr9g2599 9 33163276 33171512 ECH