Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2591 ATGAACAGTTTTGACCCCCAAAGACAAGACTTGTTGAAACAGAGATGGCAAGATAGAAGACAAATCATGGGTGCACCTTCAAACTCTTCTTCTTTAGCTTTCTACGGTAATAGCAACAACAACAACAACTCTACCAACGCTACTATGGCCAAGTATAGCAACAAATTCCTAGGCTTCCCTGGGCTTGAGGATGATGATCTTGTCTCCACTGTGGTTCCTGCAGTGACAGTTGTTTTAGAGGGACGTTCCATCTGCCAACGCATCAGTCTCCATAACCATGCTAGCTACCAAAGTCTCGCCAAAGCCCTTCGCCAAATGTTCGTGGATGGTTCTGATGATGCTGCAGAGAGTGATGATCTTGACCTGTCCAATGCCATTCCTGGTCACCTTGTTGCCTATGAAGACATGGAAAACGATCTTCTTCTAGCTGGTGACCTTAGTTGGAAGGATTTTGTACGTGTGGCAAAGAGAATTCGGATACTTCCAACCAAGGGGAACTCAAGGAAAGGTACGACAAGAGGGGCATAA 528 0.4564 MNSFDPQRQDLLKQRWQDRRQIMGAPSNSSSLAFYGNSNNNNNSTNATMAKYSNKFLGFPGLEDDDLVSTVVPAVTVVLEGRSICQRISLHNHASYQSLAKALRQMFVDGSDDAAESDDLDLSNAIPGHLVAYEDMENDLLLAGDLSWKDFVRVAKRIRILPTKGNSRKGTTRGA* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2591 175 Gene3D - 69 173 - -
Apr9g2591 175 Pfam AUX/IAA family 55 162 IPR033389 -
Apr9g2591 175 ProSiteProfiles PB1 domain profile. 72 165 IPR000270 GO:0005515
Apr9g2591 175 PANTHER AUXIN-RESPONSIVE PROTEIN IAA33 1 170 - -
Apr9g2591 175 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 170 IPR003311 GO:0005634|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2591 76 161 B3 DNA Binding Superfamily AT5G20730 31.034 4.24e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Apr9g2591 AUX_IAA 4.3e-14 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2591 - - cit:102608997 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2591 9 33122883 33123661 Apr9g2591 9 33122883 33123661 ECH