Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2586 ATGTATTCAAGTTCAAGCCAGTTCGACGGCAACGCAGCCTTCTCCGGCGGTGGATTCATGCCTTCTCAGGCCACTCAGGCTTCTGACTCTTCCGTCTTCACGTCGAAGAGTCGCGATGCTCAGCCTCTGCTTCCTCTGACGGTGAAGCAGATAAACGATGCGGTTCAGTCAACTGATGACAAAATCAATTTGATTATTGATGGTGTGGATGTTAACAATATTACTCTTGTAGGAAGGGTATGCAACAAGGCTGGGCGAATTACTGATGTTACTTTTGTGCTTGATGATGGTACTGGCAGGATTGATTGCATTAAATGGCTTCAGGAAGCTATTGAAACTAATGAAGCGGAGGGTATCACGGATGGAATGTATGTGAGGCTCCATGGACACTTGAAAGGTTTTCAGGGTAAAAGGACCTTAAATGTTTTCTCTTTCAGGCCCGTGACTGACTTTAATGAGATTGCCCACCATTTCATTGATTGCATATATGTCCATCTATATAATTCCAGGTTACGGACTGGTGTCCCTAATCAGCAATATGTTACTAATTCGGCACCAATTACTCCCACAAAAGTTTATCAAGCTCAAGCTGTTCTACCAAATCAATTCTCTGGTCAACATATCAATGGCCAGAAGAGTGTTGAAGATATGGTCTTAGATGTTTTGCATCTTCCCACAAACAGGGCAAGGGTTGAGGGAGTCCCTCGTGATCTTATTGCACAGCATCTTCGAATTTCTTTGGATAAAATCACGTCTCTCCTTGCTCTGCTTCTCTCTCTCTCTTTCTCTCTCTCTCTAACGGGATCCAACTTTTGTTGA 819 0.4371 MYSSSSQFDGNAAFSGGGFMPSQATQASDSSVFTSKSRDAQPLLPLTVKQINDAVQSTDDKINLIIDGVDVNNITLVGRVCNKAGRITDVTFVLDDGTGRIDCIKWLQEAIETNEAEGITDGMYVRLHGHLKGFQGKRTLNVFSFRPVTDFNEIAHHFIDCIYVHLYNSRLRTGVPNQQYVTNSAPITPTKVYQAQAVLPNQFSGQHINGQKSVEDMVLDVLHLPTNRARVEGVPRDLIAQHLRISLDKITSLLALLLSLSFSLSLTGSNFC* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2586 272 CDD RPA2_DBD_D 73 166 - -
Apr9g2586 272 PIRSF RPA32 2 261 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Apr9g2586 272 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 4 255 - -
Apr9g2586 272 Pfam Replication protein A C terminal 165 257 IPR014892 -
Apr9g2586 272 Pfam OB-fold nucleic acid binding domain 75 145 IPR004365 GO:0003676
Apr9g2586 272 Gene3D - 35 170 IPR012340 -
Apr9g2586 272 PANTHER REPLICATION PROTEIN A-RELATED 4 255 IPR040260 -
Apr9g2586 272 SUPERFAMILY Nucleic acid-binding proteins 43 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2586 Apr-Chr9 33084114 33087192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2586 8 225 Core DNA Replication Machinery Family AT3G02920 51.556 8.53e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2586 K10739 - gmx:100782819 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2586 9 33084114 33087192 Apr9g2586 9 33084114 33087192 ECH