Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2585 ATGGACTCTTCCTCCTCATCACCGCCAAACAACAACAACAACTCCCTCGCTTTCTCTCTTTCCAATCACTTTCCCAATCCTCCCTCTTCACACTCTTCCTCTCACCTCTCTCTTTTCAACTCCTTCACTTATCCATCTCTTACTCTCACAGGCAGCACCACCGTGGACGCATCGCCGGAGGCAACCGATGGCACCGCCAGAGGAACAATCAACCTCTCCATATTCACTGGTGGACCAAAGTTCGAGGATTTTCTGGGCGGTTCTGCCGCAACAACCACCTCCACGTGTGCACCCCCAAACCTTCCACAGTTCCCCACCGACAACAACATATACGATTCGGAGATGAAGACAACAATAGCCGCTTGCTTCCCACGCGGCTTCGCCGCCACCGAACCTCGAAAGCCCTCCCCAAAGAAAACCGTCGACACCTTCGGCCAACGCACGTCCATCTACCGCGGCGTCACACGACATAGATGGACCGGGAGATATGAGGCTCATCTTTGGGATAATAGTTGTAGAAGGGAAGGACAAAGTAGGAAAGGTAGACAAGTTTACTTGGGTGGTTATGACAAGGAAGAGAAGGCAGCTAGAGCTTACGATCTCGCAGCTCTCAAGTACTGGGGTCCAACCACCACCACCAACTTTCCTATTTCCAACTATGAGAAGGAACTGGAGGAGATGAAGAATATGACCAGGCAAGAGTTTGTTGCTTCTCTACGAAGGAAGAGCAGTGGTTTTTCTAGAGGGGCCTCAATTTACAGAGGAGTGACGAGGCACCACCAGCATGGCCGATGGCAGGCGAGAATAGGCAGAGTTGCCGGAAACAAAGACCTTTACCTTGGCACTTTCAGCACTCAAGAAGAAGCTGCAGAAGCCTATGACATTGCAGCTATCAAATTTCGGGGACTAAATGCTGTCACAAACTTTGACATGAGTCGTTATGATGTAAAGAGCATTGCAAATAGCACACTTCCCATTGGGGGTCTATCTAGCAAGAACAAGAATTCAGCAGATTGTCTATCTGAGAGCAAAAGCCACGATGCAAGCCGATCAGATGAACGAGATCCATCATCAGCTTCATCCGTAACCTTTGCATCACATCAACCTTCGAGCTCTACTTTAAGCTTTGCCATACCCATAAAGCAAGACCCTTCAGATTACTGGTCCATCTTGGGGTATCATAACCCTTCCCTTGAAAATAGTGGCGTTAGGAACACTACTAATGTTACTACAACAACCTCTTTTCCATCTTCCAACAATGCCACTGCTAGTACCACACCCTTCCACATGGACTTCTCCACTTGTCCCTCAAACACAAGCAATGATAACAATGCCGCGTTTTTCAGTGGAGGAATCTATGTTCAGCAACAAAGTGGTGGTTGTGGAGGTGGAAACAGTGGTTCTCCTTCTACTTCTTCAAGCTGTTCAATCCCATTCGCCACGCCCATATTTTCTTTAAATAGTAATAGTAGTTATGAGAGTGGTTCTGGTTATGGAAACTGGATTGGACCTACCCTGCACACATTCCAAACCCATGCAAAACCCAGTCTCTTTCAAACTCCAATATTTGGCATGGAATGA 1581 0.4775 MDSSSSSPPNNNNNSLAFSLSNHFPNPPSSHSSSHLSLFNSFTYPSLTLTGSTTVDASPEATDGTARGTINLSIFTGGPKFEDFLGGSAATTTSTCAPPNLPQFPTDNNIYDSEMKTTIAACFPRGFAATEPRKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPISNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSTLPIGGLSSKNKNSADCLSESKSHDASRSDERDPSSASSVTFASHQPSSSTLSFAIPIKQDPSDYWSILGYHNPSLENSGVRNTTNVTTTTSFPSSNNATASTTPFHMDFSTCPSNTSNDNNAAFFSGGIYVQQQSGGCGGGNSGSPSTSSSCSIPFATPIFSLNSNSSYESGSGYGNWIGPTLHTFQTHAKPSLFQTPIFGME* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2585 526 PRINTS Ethylene responsive element binding protein signature 151 162 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 PRINTS Ethylene responsive element binding protein signature 292 312 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 MobiDBLite consensus disorder prediction 339 354 - -
Apr9g2585 526 SUPERFAMILY DNA-binding domain 149 218 IPR016177 GO:0003677
Apr9g2585 526 SUPERFAMILY DNA-binding domain 251 312 IPR016177 GO:0003677
Apr9g2585 526 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 63 436 - -
Apr9g2585 526 ProSiteProfiles AP2/ERF domain profile. 150 216 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 Gene3D AP2/ERF domain 150 218 IPR036955 GO:0003700|GO:0006355
Apr9g2585 526 Gene3D AP2/ERF domain 252 312 IPR036955 GO:0003700|GO:0006355
Apr9g2585 526 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 63 436 - -
Apr9g2585 526 MobiDBLite consensus disorder prediction 1 21 - -
Apr9g2585 526 MobiDBLite consensus disorder prediction 325 366 - -
Apr9g2585 526 CDD AP2 149 218 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 Pfam AP2 domain 252 302 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 Pfam AP2 domain 150 208 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 ProSiteProfiles AP2/ERF domain profile. 252 310 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 CDD AP2 251 312 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 SMART rav1_2 150 222 IPR001471 GO:0003700|GO:0006355
Apr9g2585 526 SMART rav1_2 252 316 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2585 Apr-Chr9 33067203 33070542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2585 85 526 AP2-EREBP Transcription Factor Family AT5G57390 55.106 3.59e-147 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Apr9g2585 AP2 4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2585 K09285 - gmx:100797828 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2585 9 33067203 33070542 Apr9g2585 9 33067203 33070542 ECH