Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2584 ATGGCTACGGATTCCTCTTTTGAGGGCCTTGCACTTGATCCTTCTAAGTGCAGTAAATTGAGTATGGAGGAAAAAAGAGAACTTGTATATGAAATATCTAAGTGGTCTCATGGTGCATCCGAGATGCTTCAGTCATGGAGCCGTCAAGATATTTTGCAAATATTGTGTGCAGAGATGGGAAAAGAAAGAAAGTATACTGGGCTGACAAAGTTGAAAATTATAGAAAACCTTCTAAAAATTGTTTCTGAAAAGAAATCAGGGGGTCATGAAATCACAACAGACCCTGAATCACAATCTTCTCCTGCTCATAGTCAGAAGCCCGCCAAAAGGCAGAGAAAAATTGAGAATCCTTCTCGAGTACCTGTTCCTGCTAACGGTATTTCAGTCAATAATGGTGGTGATGTGGTTAATACTACATACTGCAAAAACTCAGCTTGCAAAGCTACCCTAAATCAAGCAGATGCATTTTGCAAAAGATGTTCTTGCTGCATTTGTCATCAATATGACGACAACAAAGACCCTAGCCTGTGGTTAATATGTAGTTCTGAAACTCCATTTCCTGGTGTTTCTTGTGGTTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGACGGTTCTGGAATTGGCAAAGATGGTGAGCGTCTCAAGCTTGATGGAGGCTTCTACTGTGTCTCTTGTGGGAAAGTAAATGATTTACTCGGATGCTGGAAAAAACAACTGATGGTTGCAAAGGATACTAGACGCGTAGATATACTCTGTTATCGTGTGTCCTTAAGCCAAAGACTTTTACAAGGGACTGAAACATATCAAGAGCTTTATAAAATTGTTGATGAAGCAGTGAATAAACTTGAACCTGAAGTGGGTCCACTGACTGGCTCACCAGTGAAGATTGGTAGGGGGATTGTGAACAGGCTTTCCTCGGGTCCTGAGGTTCAGAAACTCTGTGGTTTTGCTCTGGAATCACTTGATTCACTGCTTTTGAAAAGGGTCTTGCCTTTGTCACCCAATCCACCAATTCAAGATGCACATTTGCTGGCTCCAAATATGGTGAGGTTTGAAGAAGTCACTGCCACATCCCTCACTGTCATTTTGGGTTCTGAAGATCCCTCAGAAGAAAATATTGCTGGTTACACCTTGTGGCATCGCAAAGGTGATGATGTGGACTATCCCGTGGACCCAACTTGCACTTCACTCCTACCAAATAGAAGGTTCAGTATCAGGGGTCTAAATCCTGGTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTCGAGGGAATTGGGTATGCGTGAAGTTCAAATCACGACGGAGCACGGTGAGGATGAAGTCCCTAATTGCTCAGCTACAGAAAGAAGTCAGAGCCCAGTAACCAACTGCAGCAGCCTTTCCAATCCGTCATCAGTGGAAGATGAAACTAATAACTGTAATCCATATAGTGACCAGACTGATAACCGGGCTGACAATTATCGTTCTTATCACAAGGATAGCAACCAGCTTGCTTCTGGAAATTTATCTAACGATGCTATTAACTGTTCCAATATAGGTGGAGGGGTACTTCCCACTGATGCAGATTCCTTGTCAGACAAGCAGCATGCTGGAGGAATGACTGGCTCCATTCCTAGTTCTGACATGCTAAAGCTAGAAAACAAGCATTCTTCAGAGGAACAAGTCACCGAGGACATGAGCACTGATGATGGCTTGAATTCCCCTGTTCTACCGGCGAGGGAATGTGTGCCATTACTATGTAGCTCAGAAGGAGCCTTGCCCAATACTCCATGCAAGTTGGAAATACTTAAGGATGGGCCAGGAAGAAATGGTAGATCTAAATCCAGTGGCAAAGATCAAGAAAATGGACCAGGGAAAAGGGAGGGGCCCCAAGATGGGAGTACGTCAAAGAAGAGAAGTGGAGAAAGGCAAGATGAGGGCCAGGGCTGCGCAGCAAACGGATTTTCGGACCGTGATTTCGAGTATTATGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGACATATAGAAAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACCCCTCAAGAAGTAAGGATTGTGAAAATATACATTGATACATTTCTTGAAGATCCAGCTTCTCTTGCAGAGCAACTTGTGGACACCTTCTCAGAATGTATTTCCAGCAAAAGAACATCAGTGGTGCCAGCGGGGTTCTGCATGAAGCTTTGGCATTGA 2220 0.4333 MATDSSFEGLALDPSKCSKLSMEEKRELVYEISKWSHGASEMLQSWSRQDILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGHEITTDPESQSSPAHSQKPAKRQRKIENPSRVPVPANGISVNNGGDVVNTTYCKNSACKATLNQADAFCKRCSCCICHQYDDNKDPSLWLICSSETPFPGVSCGLSCHLECALKHDGSGIGKDGERLKLDGGFYCVSCGKVNDLLGCWKKQLMVAKDTRRVDILCYRVSLSQRLLQGTETYQELYKIVDEAVNKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKLCGFALESLDSLLLKRVLPLSPNPPIQDAHLLAPNMVRFEEVTATSLTVILGSEDPSEENIAGYTLWHRKGDDVDYPVDPTCTSLLPNRRFSIRGLNPGTEYSFKVVSNDSRELGMREVQITTEHGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDQTDNRADNYRSYHKDSNQLASGNLSNDAINCSNIGGGVLPTDADSLSDKQHAGGMTGSIPSSDMLKLENKHSSEEQVTEDMSTDDGLNSPVLPARECVPLLCSSEGALPNTPCKLEILKDGPGRNGRSKSSGKDQENGPGKREGPQDGSTSKKRSGERQDEGQGCAANGFSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSKRTSVVPAGFCMKLWH* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2584 739 MobiDBLite consensus disorder prediction 522 570 - -
Apr9g2584 739 Gene3D Immunoglobulins 345 442 IPR013783 -
Apr9g2584 739 ProSiteProfiles Fibronectin type-III domain profile. 346 441 IPR003961 GO:0005515
Apr9g2584 739 MobiDBLite consensus disorder prediction 86 126 - -
Apr9g2584 739 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
Apr9g2584 739 MobiDBLite consensus disorder prediction 440 485 - -
Apr9g2584 739 Pfam Fibronectin type III domain 346 421 IPR003961 GO:0005515
Apr9g2584 739 MobiDBLite consensus disorder prediction 438 489 - -
Apr9g2584 739 MobiDBLite consensus disorder prediction 531 546 - -
Apr9g2584 739 MobiDBLite consensus disorder prediction 593 646 - -
Apr9g2584 739 MobiDBLite consensus disorder prediction 600 640 - -
Apr9g2584 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 739 IPR044514 GO:0010048|GO:0040029
Apr9g2584 739 SMART FN3_2 344 428 IPR003961 GO:0005515
Apr9g2584 739 CDD PHD_VIN3_plant 161 226 - -
Apr9g2584 739 CDD FN3 346 428 IPR003961 GO:0005515
Apr9g2584 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 739 - -
Apr9g2584 739 SUPERFAMILY Fibronectin type III 346 424 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2584 Apr-Chr9 33044430 33049521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2584 4 474 PHD Gene Family AT4G30200 55.467 1.13e-167 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2584 - - gmx:100794721 1342.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2584 9 33044430 33049521 Apr9g2584 9 33044430 33049521 ECH