Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2565 ATGTCTTCCCAAGAGAAGAACAAGGGAGGGAAAAAGTTGCAAAAGAGCTACTTCGATGTGTTGGGTTTATGTTGCTCTTCCGAGGTACCATTGATTGAGAACATCCTGAAACCTCTTGAAGGTATCAAAGAGGTTTCAGTCATTGTCCCTTCACGAACCGTCATTGTTGTCCATGATACTCTTGTCATTTCGCAACTTCAAATTGTTAAGGCTTTGAATCAAGCAAGACTTGAAGCAAATATTAGAGTGTATGGAGACGAGAAGCACCAAAAGAGATGGCCAAGCCCTTATTCAGTGGCTTCTGGAGTTCTACTTCTGCTATCGATTCTGAAATATGTGTACCATCCTTTTAAATATTTGGCACTCGGAGCAGTTGCTGTAGGGGCATACCCAATCATCTTAAAAGCTATTGTCTCCTTTCGGAACCTTAGGCTTGACATCAACATTCTCATGATTATAGCAGTTATTGGGACAATTGCTATGAATGATTATTTGGAAGCGGGCACCATTGTTTTCCTCTTCTCAATTGCAGAATGGCTAGAGTCAAGGGCAAGTCACAAGGCAAATGCAGTAATGTCATCATTGATGAACATAGCCCCTCAAAAAGCAGTCATTGCTGAAACAGGAGAGGTTGTGGATGCTGATGAGGTGAAAGTAAACACTATCCTAGCTGTTAAAGCAGGAGAGGTGATACCCATTGATGGAATTGTTGTAGATGGAACCTGTGAAGTTGATGAGAAAACATTGACTGGGGAATCATTCCCTGTAGCAAAACAAAAGGATTCCACTGTATGGGCTGGCACCATCAATTTAAATGGTTATATTAGTGTGAAAACTACTTCACTAGCTGAGGATTGTGTGGTGGCCAAAATGGCAAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACAAGCATTCAAAGATTGATCGACAAGTTTGCCAAGTTTTATACCCCGGCTGTTGTAGTCATATCAACTCTTGTAGCAGTGATTCCAGTTGCATTAAAAGTACATGACGAGAAACACTGGCTTCACTTTGCACTTGTTGTTTTAGTAAGTGCATGTCCATGTGCACTTATCCTTTCAACGCCGGTTGCAACTTTTTGTGCTTATACGAGAGCAGCTACATCAGGTCTTCTCATCAAAGGGGGTGATTATCTTGAAACACTTGCAAAAATTAAGGTCGTGGCTTTTGACAAAACTGGTACCATAACAAAGGGTGAATTTGTGGTGACACATTTTCAATCTCTTTCAGATGACATTGATTTGGACACACTGCTTTACTGGGTGTCAAGCGTAGAGAGCAAGTCAAGCCATCCATTGGCAGCAGCAATTGTTGATTATGGAAGGTCCCTTTCCATTGAACCAAAGCCAGAAAAGGTGACAGAATTTGACAATTTTCCTGGAGAAGGAATATGTGGAAAAATTGACGACAGAGTTCTTTACATTGGAAATAAAAAAATTGCCACAAGAGCTAGATCTGAAACAGTTCCAACTTTAGAAGGTGACATTCAAAGAGGAAAGACCACAGGATACATATACTCCGAAGCAACCCTGGTTGGATTTTTCTCTCTTTCGGATGCTTGCCGGTCAGGGGTTGAGGAGGCCATAGGACAGTTGAAATCATTGGGAATCAAAACTGCCATGCTTACTGGAGATTGTCAATCTGCTGCAATGCAAGCACAGGAGCAGCTGGGGCATTCTCTGGAGTTAGTCCATGCAGAACTTTTGCCAGAGGATAAGGTGAAAATCATATCAGAATTTAAAAAGGAAGGTCCAACAGCCATGATTGGAGATGGTTTAAATGATGCGCCTGCGTTAGCTGCAGCTGATATTGGAATCTCAATGGGCATTTCAGGTTCTGCACTGGCAAGTGAGACAGGCAATATAATTCTTATGTCAAATGACATTAGGAAGATACCAGAAGCCATTAAACTTGCTAGAAAAGCTCGTAGGAAAGTGAGAGAGAATATTATTTTGTCAGTCATTACTAAGGCTGGGATTCTTGGTTTGGCCATTGGTGGTTATCCACTTGTTTGGGCTGCAGTTGTTGCTGATGTTGGAACATGTCTATTGGTCATCTTTAACAGCATGTTACTTCTGAAGAAAGGACACAAACATGGAGGAAAATGTTGTAAATCTTCCACTCAACTACATAACCACAAAAATGGATGTGGTGGTACTACAGGTAGTTCCTCTCATCACCATCATCATCATGATCATCATCATAAGCATCATCAACATGAAAATCAACATCATAGCCACAAGGATTGTTGCTCAGACAAGAAAAAGATGTCTCAGCCTCAGAAGTGTGCCTCCCAGACATGTTCTTCAACTTGTCCACCCTGTAATACCATGAAGAGTCAGGATCAATGCAATGGAAGTGATGAATTCCAGAAACATGATCATTGTCATCATGGACGATGTGACAATGATCAAGGTGGAGGACAGAAGCATGATACTGAAAAGGAGGGTTGTTCAGATTCCCAAAACTTGATTCTAAATGCAGAAGACAATGGTGCAGTAAACAAGCATGGTAATTGTTTGGGACACAAGTCCCACGGGACAAAACACCACCATGACCAAAATTTTGACATGGTTCATGATAGCACTTCACTTACTTCTCCTTGCCATACCAATCCCTCTTCTATAAAAGGAAGTGCCAAAGAACATTGCCACTTGATCCATGGTGGTGAAAATCTGAAAGACCAAGAACACAGAAACATGTTAGGATCCAATCATGACAACCATGAAAAATCATGTTGTCATTCTGATTTTAAGCAGCATGGAACAGGTGAAATATCCATTGACATCACCAATGAGCATGTTGAAATAGCTTCAATGCATGGTTGCTCAAGTTTGGAAGAGAAAGAAAAAGGTTCCTGTTGTGAAGGTTGCTCAGACACATGCGAAAAATTATCTATTCTGTGTGGCTGTGAGAGTGCAAATGAGATAAAAGATAGTGCATGTTGTAGAAATGAGATCTCTTCCAAAGAATGCAAGGAATTCCCTATAGTGCATGCTTGTATAAGTTTGGATAAAAGACAAGTTGGTGGATGTTGTAAGAGCTATATGAGGGAATGTTGTAGGAAACATGGACACTCAGGAGCTGGTTTTGTAGGAGGCTTATCAGAAATTATTACAGAATAG 3147 0.4093 MSSQEKNKGGKKLQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHDTLVISQLQIVKALNQARLEANIRVYGDEKHQKRWPSPYSVASGVLLLLSILKYVYHPFKYLALGAVAVGAYPIILKAIVSFRNLRLDINILMIIAVIGTIAMNDYLEAGTIVFLFSIAEWLESRASHKANAVMSSLMNIAPQKAVIAETGEVVDADEVKVNTILAVKAGEVIPIDGIVVDGTCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYISVKTTSLAEDCVVAKMAKLVEEAQNSKTSIQRLIDKFAKFYTPAVVVISTLVAVIPVALKVHDEKHWLHFALVVLVSACPCALILSTPVATFCAYTRAATSGLLIKGGDYLETLAKIKVVAFDKTGTITKGEFVVTHFQSLSDDIDLDTLLYWVSSVESKSSHPLAAAIVDYGRSLSIEPKPEKVTEFDNFPGEGICGKIDDRVLYIGNKKIATRARSETVPTLEGDIQRGKTTGYIYSEATLVGFFSLSDACRSGVEEAIGQLKSLGIKTAMLTGDCQSAAMQAQEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIGDGLNDAPALAAADIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARKARRKVRENIILSVITKAGILGLAIGGYPLVWAAVVADVGTCLLVIFNSMLLLKKGHKHGGKCCKSSTQLHNHKNGCGGTTGSSSHHHHHHDHHHKHHQHENQHHSHKDCCSDKKKMSQPQKCASQTCSSTCPPCNTMKSQDQCNGSDEFQKHDHCHHGRCDNDQGGGQKHDTEKEGCSDSQNLILNAEDNGAVNKHGNCLGHKSHGTKHHHDQNFDMVHDSTSLTSPCHTNPSSIKGSAKEHCHLIHGGENLKDQEHRNMLGSNHDNHEKSCCHSDFKQHGTGEISIDITNEHVEIASMHGCSSLEEKEKGSCCEGCSDTCEKLSILCGCESANEIKDSACCRNEISSKECKEFPIVHACISLDKRQVGGCCKSYMRECCRKHGHSGAGFVGGLSEIITE* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2565 1048 Gene3D - 10 83 - -
Apr9g2565 1048 PRINTS P-type cation-transporting ATPase superfamily signature 245 259 - -
Apr9g2565 1048 PRINTS P-type cation-transporting ATPase superfamily signature 396 410 - -
Apr9g2565 1048 PRINTS P-type cation-transporting ATPase superfamily signature 542 552 - -
Apr9g2565 1048 PRINTS P-type cation-transporting ATPase superfamily signature 596 615 - -
Apr9g2565 1048 PRINTS P-type cation-transporting ATPase superfamily signature 620 632 - -
Apr9g2565 1048 SUPERFAMILY HAD-like 394 697 IPR036412 -
Apr9g2565 1048 SUPERFAMILY HMA, heavy metal-associated domain 12 80 IPR036163 GO:0046872
Apr9g2565 1048 Gene3D - 185 299 - -
Apr9g2565 1048 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 147 699 IPR027256 GO:0006812|GO:0016021|GO:0019829
Apr9g2565 1048 Gene3D - 407 528 IPR023299 GO:0000166
Apr9g2565 1048 Pfam haloacid dehalogenase-like hydrolase 392 610 - -
Apr9g2565 1048 MobiDBLite consensus disorder prediction 722 758 - -
Apr9g2565 1048 SUPERFAMILY Calcium ATPase, transmembrane domain M 147 390 IPR023298 -
Apr9g2565 1048 Pfam E1-E2 ATPase 206 374 - -
Apr9g2565 1048 SFLD p-type atpase 379 648 IPR044492 -
Apr9g2565 1048 Gene3D - 387 647 IPR023214 -
Apr9g2565 1048 MobiDBLite consensus disorder prediction 731 750 - -
Apr9g2565 1048 ProSitePatterns E1-E2 ATPases phosphorylation site. 398 404 IPR018303 -
Apr9g2565 1048 PRINTS Copper-transporting ATPase signature 2 16 - -
Apr9g2565 1048 PRINTS Copper-transporting ATPase signature 187 205 - -
Apr9g2565 1048 PRINTS Copper-transporting ATPase signature 318 332 - -
Apr9g2565 1048 PRINTS Copper-transporting ATPase signature 574 591 - -
Apr9g2565 1048 PRINTS Copper-transporting ATPase signature 631 645 - -
Apr9g2565 1048 ProSitePatterns Hypothetical cof family signature 2. 596 618 - -
Apr9g2565 1048 ProSiteProfiles Heavy-metal-associated domain profile. 15 81 IPR006121 GO:0046872
Apr9g2565 1048 SUPERFAMILY Calcium ATPase, transduction domain A 210 295 IPR008250 -
Apr9g2565 1048 Coils Coil 291 311 - -
Apr9g2565 1048 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 147 489 - -
Apr9g2565 1048 SFLD C1.7: P-type atpase like 379 648 - -
Apr9g2565 1048 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 5 726 - -
Apr9g2565 1048 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 170 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr9g2565 1048 CDD P-type_ATPase_HM 99 698 - -
Apr9g2565 1048 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 5 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2565 Apr-Chr9 32846652 32856427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2565 11 847 Primary Pumps ATPases AT4G30110 60.654 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2565 K01534 - gmx:100817567 1538.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2565 9 32846652 32856427 Apr9g2565 9 32846652 32856427 ECH