Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2553 ATGTCTTCGTGTTTGAGTGGAGCTGGTGGAAGAACCTATGGATTCGATTTCGAATTCGTGAAATCCCCGTCATCGTCGACCAGAACTTCGCACACATCTTCTTCCCCTTCCTCAACCATCTCCGAATCCAGCAATTCAGCACTAGCAATCTCCACCAGAAAACCTAGGACTCCACGAAAGCGACCCAACCAAACCTACAATGAAGCCGCGGCGCTCCTCTCCACGGCGTACCCGAACCTCTTCTCCACCAAGAACCTCAAAACGCACGCCAAATTCTCGAAACCCGCGTTCGATTATGACTCTTCGGAGCTGTTATTGCCGTTTACGGTGTTGGAAACTTCGTCGTCGTGTTTCCTATTGGAGCAACCGATGCAACGCCACAAGCCGATGGAGCCAAAGGTGGTGAACGTGCAGGAGAAGCCGTGCCAGAGCCCAGGGGAGATAAGCTCCAGAGTGAATTCCATTGAATTGAACGATGATTGCGAAGAGAGTTTCGACGCCGAATCGATTCTCGACGAGGAAATCGGAGAAGGCATCGATAGCATCATGGGGAGCAGAGTCCAAGAGGATGATTCCAACGACGCTATTCCGTGGACCGCTTTTGGCGGGAAATTGGATTTCCGAGTCGGGTTTCCGAGACCCGGAATTAGGGCTCTCCGCCACGTGGATGATGGTAATTGGTGGAATTTTCCGGCCGTTGATATCCTTCAGATATCGCCCAAAGTCAGCAACAAGCCTCCGCCCTTGGCGGCGGAGAAGAAGAATAAGAAGAAGAAGAAGGTGGAGAAACCGGTCGTTGAGTTGAACACCGCCGAATTGCCCAAACCAAAACAGGGTTTGATGTTGAAATTGAATTACGACGGCGTTCAGAATGCCTGGTCTGACCGTGGCTCACCCTTCGCCGCCGACAGCCCCGTCTCCGATGCACCGGAAAATGACGTTACTGCGCGGTTGTCGCAAATTGACTTGTTGTGGGACAATGGGGGAGTGAGAGAAGCTAGCGTGCTGCGCTACAAAGAGAAGCGAAGAACGCGCCTCTTCTCGAAGAAGATCAGGTATCAGGTCAGAAAAGTCAACGCGGATCGACGGCCCAGAATGAAGGAAAATGTATCACGGAAAAGTTCATATCAATCCTGGAAACGTGAAAGGGGGAATAAGGGGCGATTTGTTAGGAGGCTCAATTCTAGCTCAAATGCGCACAGATGA 1206 0.5149 MSSCLSGAGGRTYGFDFEFVKSPSSSTRTSHTSSSPSSTISESSNSALAISTRKPRTPRKRPNQTYNEAAALLSTAYPNLFSTKNLKTHAKFSKPAFDYDSSELLLPFTVLETSSSCFLLEQPMQRHKPMEPKVVNVQEKPCQSPGEISSRVNSIELNDDCEESFDAESILDEEIGEGIDSIMGSRVQEDDSNDAIPWTAFGGKLDFRVGFPRPGIRALRHVDDGNWWNFPAVDILQISPKVSNKPPPLAAEKKNKKKKKVEKPVVELNTAELPKPKQGLMLKLNYDGVQNAWSDRGSPFAADSPVSDAPENDVTARLSQIDLLWDNGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKENVSRKSSYQSWKRERGNKGRFVRRLNSSSNAHR* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2553 401 MobiDBLite consensus disorder prediction 364 384 - -
Apr9g2553 401 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 378 - -
Apr9g2553 401 Pfam CCT motif 331 367 IPR010402 GO:0005515
Apr9g2553 401 MobiDBLite consensus disorder prediction 22 52 - -
Apr9g2553 401 PANTHER OS02G0148000 PROTEIN 1 378 - -
Apr9g2553 401 MobiDBLite consensus disorder prediction 22 63 - -
Apr9g2553 401 ProSiteProfiles CCT domain profile. 331 373 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2553 Apr-Chr9 32743314 32747823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2553 261 375 C2C2-CO-like Transcription Factor Family AT1G68520 39.855 2.34e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr9g2553 CCT 5.6e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2553 - - aprc:113845796 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2553 9 32743314 32747823 Apr9g2553 9 32743314 32747823 ECH