Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2537 ATGGCAATAGATCTGGTTGCTCTTCCCAATACGAGAATGGAAGAACAGATAGCCATACAGGAAGCAGCTTCTGCGGGGTTGAAAAGCATGGAGCATCTAATCCGTCTCATTTCTTCTTCTTCATCTTCTTCTTCTGCGCCATCCTCTTCCACACGCCACCACCGTCTCGATCTCAATCAACTTGACTGCACACAAATCACCGACTTCACGGTTTCCAAGTTCAAACAAGTCATCAACCTGTTGAATCGCACCGGTCACGCTCGCTTTCGTCGCGCGCCTTCTTCTCCTTCTCCTTCTCCTTCTCCCTCTCCCCCTCCCTCTGTTCCTTCTCAACCTCACTCCCTCACTCTTGATTTTGCCAAACCCCTTCTCGTCAAGTCAAATCCCAATCTTAACCCTTCTTCTGCCCATTTATCCATTTCTCGCTTCTCAAACACCAAGGACAAGGATAAGGACTGCAACTATACCATATCCCCTCCCATCTCAACCACCACCTCCTCCTTCATGTCCTCCATCACCGGCGACGCCAGCGTTTCCGACGGCAAGGTTGGCCCCTCCATCCTCGCCGCCGCCAAGCCCCCTCTCTCCTCATCCCACCGGAAAAGGTGTCACGACGCCACCCTCTCCGCCGGAAAAGCCTCCTCCTCCGCCCACTGCCATTGCTCCAAGAGAAGGAAATCCCGAGTGAAACGAATGATTCGTGTGCCGGCGATAAGTTCAAAGGTTGCCGATATCCCCGCGGACGAGTACTCATGGAGAAAGTACGGTCAAAAGCCCATCAAGGGATCACCCTACCCACGGGGGTACTATAAGTGCAGTAGCGTGAGGGGGTGTCCAGCGAGGAAGCACGTGGAGAGAGCCCAAGACGACCCCAACATGCTCATCGTTACCTACGACGGAGAACACCGTCACCCGCAAACTCCCGCAACCGGTGCCGCTTTTACCTCTCAGGCTATTTAA 960 0.5365 MAIDLVALPNTRMEEQIAIQEAASAGLKSMEHLIRLISSSSSSSSAPSSSTRHHRLDLNQLDCTQITDFTVSKFKQVINLLNRTGHARFRRAPSSPSPSPSPSPPPSVPSQPHSLTLDFAKPLLVKSNPNLNPSSAHLSISRFSNTKDKDKDCNYTISPPISTTTSSFMSSITGDASVSDGKVGPSILAAAKPPLSSSHRKRCHDATLSAGKASSSAHCHCSKRRKSRVKRMIRVPAISSKVADIPADEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYDGEHRHPQTPATGAAFTSQAI* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2537 319 MobiDBLite consensus disorder prediction 85 114 - -
Apr9g2537 319 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 9 317 - -
Apr9g2537 319 Pfam WRKY DNA -binding domain 248 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2537 319 Pfam Plant zinc cluster domain 200 244 IPR018872 -
Apr9g2537 319 SUPERFAMILY WRKY DNA-binding domain 244 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g2537 319 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2537 319 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 317 IPR044810 GO:0003700
Apr9g2537 319 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2537 319 Gene3D WRKY domain 233 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g2537 319 MobiDBLite consensus disorder prediction 95 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2537 Apr-Chr9 32548395 32549858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2537 1 307 WRKY Transcription Factor Family AT2G24570 46.884 2.83e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g2537 WRKY 4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2537 - - gmx:732589 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2537 9 32548395 32549858 Apr9g2537 9 32548395 32549858 ECH
Apr7g0886 7 15874523 15876606 Apr9g2537 9 32548395 32549858 PCT
Apr9g2537 9 32548395 32549858 Apr1g2345 1 33108106 33109911 PCT