Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2536 ATGCCAATTGGACCTGGAAACATATTTGGATTTGGTGAAGGTGAGCCTGTGACGCTTGCTTTATGTGCACCCAAATCTAGGCCATCCTCCAGCATTGAGAAGGAAGCAAGGAGCAATAAAGAACTGGAGAACCAGAGCCAGTCGTTTGGGGGAAGTAGCAGTAATAACTACACAACCACAAGCAGCAACATTACAAATTACACAACCAGATTTAATAGTAGCACTTCTCTTTGGGACTCTGAGAATAGCAATAGCAATAGCAATAAGAATTGGCAAAGCAGTGGAGTAAGAAGAGATGGGGAGGGGCAGATATTGGATGCATCCAATTTGAGGGTATTTACTTTGGCAGAACTTAAGGCAGCCACTCAAAATTTCAGAGCTGACACTGTCATAGGAGAGGGAGGTTTTGGCAGAGTATACAAAGGTTTGATTAAGGAGAGAAATAAACGTGACCGATTCACTGTTGCTGTCAAGAAATTGAATCCTCACAGTTTGCAAGGAGTTGAGCAATGGCAGACAGAGGTGAATTTTTTAGGAAGGCTTTCTCATCCGAACCTTATAAAGTTGTTTGGGTTCGGGAGAGATGATGGTGAACTATTCCTGGTGTATGAATTTATGCAACGAGGTAGCTTGGATAACCACCTATTTGGAAGAGGTGCAAATGTTAGGCCACTTTCGTGGGACACAAGGCTAAAGGTTACGATTGGAGCGGCGAGGGCACTAGCTTTCCTACACTCACAAGAGAAGAAAATTATATGCAGAGATTTCAAGGCTTCAAATATACTACTTGACAAGACATATGCAGTCAAGTTATCAGACTTTGGCTTAGCCAAATATGGTCCTACTGCTGATCATAGTCATGTAAGTACACAGGTTATTGGAACACAAGGCCATGCAGCTCCAGAGTACATTGCCACAGGTCACTTGTATGTTAAATCTGATGTGTACGGATTTGGGATTCTTTTGATGGAAATTTTGACTGGCAAGCGGATAATGGATATACGTAAACACTTCTGTCAGGAAAAGCCCTTAATTGATTGGCTCAAATTGAATCTATTAAACAGAGTGAAAATGAGAAGCACTATGGATGCAAAGTTAGAAGGGAGGTATCCATCCAATTTAGCTTTACAATTAGCTCAACTCACTCTCAAATGCATCCAAGATGACCCCAAAGTGAGGCCATCAATGAAAGAAGTTGTTGAAACATTGGAAAAGATTGAAGCCGCTAATGAGAAACCAGCTGATAAAAAAAACCGTGCCATTCTTTCCAGGGTAGTTCAACAACAAGATCTACCAGATGGAGGTTAA 1308 0.4159 MPIGPGNIFGFGEGEPVTLALCAPKSRPSSSIEKEARSNKELENQSQSFGGSSSNNYTTTSSNITNYTTRFNSSTSLWDSENSNSNSNKNWQSSGVRRDGEGQILDASNLRVFTLAELKAATQNFRADTVIGEGGFGRVYKGLIKERNKRDRFTVAVKKLNPHSLQGVEQWQTEVNFLGRLSHPNLIKLFGFGRDDGELFLVYEFMQRGSLDNHLFGRGANVRPLSWDTRLKVTIGAARALAFLHSQEKKIICRDFKASNILLDKTYAVKLSDFGLAKYGPTADHSHVSTQVIGTQGHAAPEYIATGHLYVKSDVYGFGILLMEILTGKRIMDIRKHFCQEKPLIDWLKLNLLNRVKMRSTMDAKLEGRYPSNLALQLAQLTLKCIQDDPKVRPSMKEVVETLEKIEAANEKPADKKNRAILSRVVQQQDLPDGG* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2536 435 ProSitePatterns Protein kinases ATP-binding region signature. 131 159 IPR017441 GO:0005524
Apr9g2536 435 MobiDBLite consensus disorder prediction 24 97 - -
Apr9g2536 435 ProSiteProfiles Protein kinase domain profile. 125 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2536 435 MobiDBLite consensus disorder prediction 411 435 - -
Apr9g2536 435 SUPERFAMILY Protein kinase-like (PK-like) 110 414 IPR011009 -
Apr9g2536 435 Pfam Protein tyrosine and serine/threonine kinase 128 403 IPR001245 GO:0004672|GO:0006468
Apr9g2536 435 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 45 435 - -
Apr9g2536 435 Gene3D Transferase(Phosphotransferase) domain 1 206 430 - -
Apr9g2536 435 MobiDBLite consensus disorder prediction 42 97 - -
Apr9g2536 435 Gene3D Phosphorylase Kinase; domain 1 109 205 - -
Apr9g2536 435 PANTHER OS01G0588500 PROTEIN-RELATED 45 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2536 Apr-Chr9 32529813 32534122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2536 70 403 Glycoside Hydrolase AT3G07070 39.403 4.07e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr9g2536 PK_Tyr_Ser-Thr 9.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2536 - - gmx:100816903 505.368