Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2535 ATGGGGAACTGTTTGAGTCTTCAATCAGGTTCTCCAAGTCCCAAGTTCAATACTGCCCCAGATCCCTACAATCAATCAGGGAGCAATCAGTTTTCTGCTGGTCTCAGCAACACAAGATTATTGCCGAATGACAATTCTACTTCTCTTGGGCATAGCAGTCACTCTGGAAGAATCAGCAGGCTTTTGGGGCCAAATAGTAGTAATAACTACTCAACAACAGGAAACAATACTAGTACATCCCTTTGGGGCTCTGAGAATAGCTATGCCTCTAGAGTGAGAGACGAGGAGGAGTTTCCTTATGGGCAGATCTTGGATGCTGCAAACTTGAGAGTGTTTACTTTGGAAGAACTGAGGGCAGCCACAAAAAATTTTGGAGCTGACACTGTGTTAGGAGAGGGAGGTTTTGGTAGAGTATACAAGGGTTTGATTAAGGATAGAACAGCATCAAATAGAGGTGAGAGATTGACTATTGCCATCAAGAAATTGAATTCTGAAAGCAGGCAAGGAGTTGCAGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTCTCGCATCCCAACCTTGTCAAGTTGTTAGGATTCGGGCGAGAGGGCAGTGAGCTGTTCCTGGTGTATGAATTCATGCATCGTGGCAGCTTGGATAACCACCTATTTGGAAGAGGTGCAAGTGTTAGTCCACTTTCCTGGGACACAAGGCTAAAAGTTATGATCGGAGCAGCTAGGGGACTAGATTTCCTTCACTCCTTAGACAAGAAAATTATATACAGAGATTTTAAGCCCTCAAATATACTACTTGACAAGACATGTACAGCCAAATTATCTGACTTTGGCTTGGCCAAATCTGTTCCTGCTGAAGATCATAGTCACGTATCAACAAAAGTTGTGGGAACATATGGCTATGCTGCTCCCGAGTACATTGCCACAGGTCATTTATACGTGAAAAGTGATGTATATGGATTTGGGATTGTTTTGGTGGAGATGCTGACTGGGAAGCGGATTGGTGACATAATTCGCCTGTGTCAGCAAAAGTCCTTGCGGGATTGGCTCAAAACAAATCTACTAAGTCGAGGGAAAATAATAAGCACAATGGATGCAAAGTTGGAAGGGAAGTATCCATGCAATTTAGCTTTAAAAGTAGCTCAACTGGCTCTCAAATGCATCCAAGTAGACCCTAAGGTGAGGCCATCAATGAAAGAAGTGGTCGAAACATTGGAACATGTTGAAGCAGCCAATGAGAAACCAGCTGATAACAGAAAACGGGTTACACATTCCCGAGTTGTTCGACTACATGGCAGGCCAGATGGCGGTTAA 1311 0.4378 MGNCLSLQSGSPSPKFNTAPDPYNQSGSNQFSAGLSNTRLLPNDNSTSLGHSSHSGRISRLLGPNSSNNYSTTGNNTSTSLWGSENSYASRVRDEEEFPYGQILDAANLRVFTLEELRAATKNFGADTVLGEGGFGRVYKGLIKDRTASNRGERLTIAIKKLNSESRQGVAEWQSEVNFLGRLSHPNLVKLLGFGREGSELFLVYEFMHRGSLDNHLFGRGASVSPLSWDTRLKVMIGAARGLDFLHSLDKKIIYRDFKPSNILLDKTCTAKLSDFGLAKSVPAEDHSHVSTKVVGTYGYAAPEYIATGHLYVKSDVYGFGIVLVEMLTGKRIGDIIRLCQQKSLRDWLKTNLLSRGKIISTMDAKLEGKYPCNLALKVAQLALKCIQVDPKVRPSMKEVVETLEHVEAANEKPADNRKRVTHSRVVRLHGRPDGG* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2535 436 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 10 436 - -
Apr9g2535 436 PANTHER OS01G0588500 PROTEIN-RELATED 10 436 - -
Apr9g2535 436 MobiDBLite consensus disorder prediction 1 83 - -
Apr9g2535 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Apr9g2535 436 CDD STKc_IRAK 130 405 - -
Apr9g2535 436 ProSiteProfiles Protein kinase domain profile. 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2535 436 ProSitePatterns Protein kinases ATP-binding region signature. 130 161 IPR017441 GO:0005524
Apr9g2535 436 Pfam Protein kinase domain 128 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2535 436 Gene3D Transferase(Phosphotransferase) domain 1 208 429 - -
Apr9g2535 436 Gene3D Phosphorylase Kinase; domain 1 108 207 - -
Apr9g2535 436 SUPERFAMILY Protein kinase-like (PK-like) 105 404 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2535 Apr-Chr9 32526856 32529813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2535 101 412 Receptor kinase-like Gene Family AT4G02010 44.444 6.26e-84 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr9g2535 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2535 - - gmx:100813304 680.633