Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2529 ATGGTTCAAGTTCAATTTCAACCAGAATGCTTGTCCCCAACCATGCCTCGAAGACTTGGTTACCACTGTCCAATTGCAATCAATGCTTGTCTCACAGTGAAAATCAAGGCATTAGAATATGATGTAGGAAATAAATCTTTTAGCCTTTTCAGAATTATCATTTTCTTATTTCTTGAAACAATGATGATGAAGTCTTGTGATCAACTGACTGCAGAGAAACCTCCTTCATCTCCTGTGGATCCACAGAGCTCCTTGTCGCGCCACGAATCTGGAACACTTCTGTTCATCATTCTTGGAGGGATTGCAGTGCTCATCTTATTGGTGATTCTTGTGTTTATATTTCGGAAGCGTATCAAAAGGCCAACAGCGTTGATGGAGAAGACAGCTCCAACAAGTCAGCAGCATGGTAATTTGGAGAAAGCATCACAATTAAATTCCTACACGTATTGTGCAGGATCCGTGTCCATGGAGTTTTTTAGTGGAAACCTTCGGACAATTAGCTACTTTGGTTTACATACATTGAGGAGGGCGACTAAAAATTTCCATCCCGGAAATCTTCTTGGAAGTGGAGGATTTGGGCCTGTCTATAAGGGAAAGTTGGCAGATGGAAGGCTAATTGCAGTCAAGAAATTGTCTCTTGACAAATCTCAACAAGGAGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATCCAACACAAAAATCTGGTTCGCCTTCTTGGATGTTGCACAGATGGACCCCAAAGGATACTTGTGTATGAATACATGAAGAACAGAAGTTTGGACCTCTTAATACATGGAAAGAGTGATCAATTTCTGAATTGGAGCACTAGATTCCAAATTATTCTTGGAGTAGCCCGGGGATTGCAATACCTCCACGAGGATTCACATTTAAGAATTGTTCACCGAGATATCAAAGCAAGTAACATTCTTCTTGATGAGAAGTTTCAGCCGAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAGTTCGCGGGAACATTAGGTTATACTGCTCCTGAATATGCCATTAGAGGAGAACTGTCCGAAAAAGCAGATATCTATAGCTTTGGAGTTCTTGTGCTTGAAATCATCAGTTGCAGGAAAAACACAGATCTTACTTTATCATCAGAAATGCAATACCTCCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGTTGATGGAGATTGTGGATCCAAAGCTGATAGAAGATGGGTTGGTAGAAAAGGATGTTATGCAAGCATTCCACGTAGCCTTCTTATGCCTTCAAGCACATGCAGATTTGAGACCAGCCATGTCAGAGATCGTAGCACTGTTAACATTCAAAGTTGAAATGGTTAAAACACCATCAAGACCAGCCTTCCTTGATCGAAGGCGCATAATGGATGATGAAAACCACTCTTGGGGAGACATATCCGAGACTTTCACAACTCCAGTGACCAGTGATTCTGCTTTCCTACGTAAAGCACCAGTATCTGAAGACCAATGA 1527 0.4145 MVQVQFQPECLSPTMPRRLGYHCPIAINACLTVKIKALEYDVGNKSFSLFRIIIFLFLETMMMKSCDQLTAEKPPSSPVDPQSSLSRHESGTLLFIILGGIAVLILLVILVFIFRKRIKRPTALMEKTAPTSQQHGNLEKASQLNSYTYCAGSVSMEFFSGNLRTISYFGLHTLRRATKNFHPGNLLGSGGFGPVYKGKLADGRLIAVKKLSLDKSQQGEKEFLAEVRMITSIQHKNLVRLLGCCTDGPQRILVYEYMKNRSLDLLIHGKSDQFLNWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLSSEMQYLPEYAWKLYEKSMLMEIVDPKLIEDGLVEKDVMQAFHVAFLCLQAHADLRPAMSEIVALLTFKVEMVKTPSRPAFLDRRRIMDDENHSWGDISETFTTPVTSDSAFLRKAPVSEDQ* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2529 508 SUPERFAMILY Protein kinase-like (PK-like) 160 455 IPR011009 -
Apr9g2529 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Apr9g2529 508 SMART serkin_6 181 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2529 508 PANTHER RECEPTOR-LIKE KINASE 160 468 - -
Apr9g2529 508 ProSiteProfiles Protein kinase domain profile. 181 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2529 508 Gene3D Phosphorylase Kinase; domain 1 141 257 - -
Apr9g2529 508 Gene3D Transferase(Phosphotransferase) domain 1 258 463 - -
Apr9g2529 508 CDD STKc_IRAK 187 453 - -
Apr9g2529 508 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 160 468 - -
Apr9g2529 508 Pfam Protein tyrosine and serine/threonine kinase 184 450 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2529 Apr-Chr9 32487763 32490836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2529 71 503 Receptor kinase-like Gene Family AT1G56120 39.862 2.25e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr9g2529 PK_Tyr_Ser-Thr 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2529 - - aprc:113874742 978.008