Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2520 ATGAACTCAGTATCTCCATCTCGGTCATTTTCCAAGAGCCCTAAGATGCCCCTCCTGCCTCAAATTCAAGCACTGCCTCCCCCACCTCCTAATGAAGATTGTTTATCAACTATCTGCACAGAACCTTATACAAATTCTCCACCTGGAGCACCTTGCAGATGTGTCTGGCCCATGCGAATTGGTCTTCGCCTTAGCATTTCTCTTTACACCTTCTTCCCTTTGGTTCCAGAACTAGCTTCTGAAATTGCCACGGGGGTTTTCATGAAACAAAATCAAGTGCGGATTATGGGAGCAAATGCAGCAAACCAGCAACCTGAGAAAACTATTGTACTTATTGATTTGGTGCCATTTGGGGAAAAGTTTGATAATACCACAGCCTTTATGACTTCTGACAGATTTTGGCATAAAAAGGTTCTTATAAAAGCTTCCTACTTTGGAGACTATGATGTGTTATATGTGAGCTATCCAGGTTTACCTCCTTCTCCTCCTTTGCCTCCTTCAAGCATTACCATGATAGATGGTGGTCCATATTCCACTGATGACAATAATGGAAGGACAATAAAGCCCTTTGGAGTTGACATACAGCAGAGGCAGCATAAAGGTGGACTTAGCAGAGGCATAATTGCCACTATTGCTGTTTCAGTTTCTGTAGCAGTTGTTTTATGTGCTGGTGCTGGTGCTGCCTGGGTCATGTTCAAGCTCAGAGACCATGTTAGTCAGCCAGTTGCTCAGCTTTCATTACCATCTCTTACCAAAGAACCAGGTACTGCTAGGTCAACAATTAGAGGTGGGGGAGTCGGTTCTGTTTCCACATCATTTCGATCTAGCATTGCTGCTTATACAGGATCTGCTAAGACTTTCAATATGAATGACATTGAGAAAGCTACTGATACTTTTAATGCTTCAAGAATACTTGGAGAAGGCGGTTCTGGGTTTGTTTACAATGGTATTCTTGAAGATGGAATGAAAGTGGCAGTCAAGGTTCTAAAGAGAGAGGATCATCATGGTGACCGTGAATTCTTAGCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAATCTGGTCAAGTTAATTGGTATATGTACTGAGGGTAGCTTCCGCTGCTTGGTTTATGAACTTATTCCAAATGGAAGCGTGGAATCTCATTTACATGGGATTGACAAAGAAAACAGCACACTTGACTGGAGTGCCCGAATGAAGATAGCTCTTGGTGCTGCTCGTGGTCTAGCTTATCTGCATGAAGATTCAAATCCCCGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACACCTAAAGTGTCTGATTTTGGTTTGGCTCGAACGGCAACAGATGAGGAGAACAAACACATATCAACACGAGTCATGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACTGGGCATCTTCTTGTTAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACTGGAAGAAAACCTGTAGACCTATCACAAGCTCCTGGTCAAGAGAATCTTGTTGCTTGGGCTCGTCCACTTCTCACAAGTAAAGAAGGATTGGAAACAATAATAGACCCATCTCTGGGAGCTGATGTGCCTTTTGATAGTGTGGCAAAAGTTGCTGCCATTGCTTCAATGTGTGTGCAACCAGAGGTATCAAACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTATGTAATGAATGTGATGAAACGAGAGAAGAAGCTGGTTCAAGAAGTTCTAGCCAGGAAGATTTATCTATTGATTTAGATGTAGGAATGAGGACTGTTTCTGGTCAACTACCAGATAATTTCCAAAGCCAATTCTCAGCTACTAACTTTGATTCTGGAGTTGATATTGAAAGAGGCTTGTCAGCATCAGAACTATTCAGTTCATCAGCAAGATTTGGCAGGCTGGAATCTGGATCATTTAGAAGAAACTCTTATTCAGGTCCTCTGAGAACTGGAAGAAGCAAGCGGTTGTGGCAGATAATTAGAAGTCTTTCTAGTGGCAGCGTCACTGAACATGGAACCATGTTGAAGTTATGA 2079 0.4233 MNSVSPSRSFSKSPKMPLLPQIQALPPPPPNEDCLSTICTEPYTNSPPGAPCRCVWPMRIGLRLSISLYTFFPLVPELASEIATGVFMKQNQVRIMGANAANQQPEKTIVLIDLVPFGEKFDNTTAFMTSDRFWHKKVLIKASYFGDYDVLYVSYPGLPPSPPLPPSSITMIDGGPYSTDDNNGRTIKPFGVDIQQRQHKGGLSRGIIATIAVSVSVAVVLCAGAGAAWVMFKLRDHVSQPVAQLSLPSLTKEPGTARSTIRGGGVGSVSTSFRSSIAAYTGSAKTFNMNDIEKATDTFNASRILGEGGSGFVYNGILEDGMKVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEGSFRCLVYELIPNGSVESHLHGIDKENSTLDWSARMKIALGAARGLAYLHEDSNPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDEENKHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQAPGQENLVAWARPLLTSKEGLETIIDPSLGADVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDETREEAGSRSSSQEDLSIDLDVGMRTVSGQLPDNFQSQFSATNFDSGVDIERGLSASELFSSSARFGRLESGSFRRNSYSGPLRTGRSKRLWQIIRSLSSGSVTEHGTMLKL* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2520 692 CDD STKc_IRAK 305 573 - -
Apr9g2520 692 SUPERFAMILY Protein kinase-like (PK-like) 280 572 IPR011009 -
Apr9g2520 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Apr9g2520 692 ProSiteProfiles Protein kinase domain profile. 299 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2520 692 Gene3D Transferase(Phosphotransferase) domain 1 375 598 - -
Apr9g2520 692 PANTHER OS01G0750732 PROTEIN 3 692 - -
Apr9g2520 692 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 692 - -
Apr9g2520 692 MobiDBLite consensus disorder prediction 1 16 - -
Apr9g2520 692 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Apr9g2520 692 MobiDBLite consensus disorder prediction 1 24 - -
Apr9g2520 692 Gene3D Phosphorylase Kinase; domain 1 270 374 - -
Apr9g2520 692 Pfam Protein tyrosine and serine/threonine kinase 301 572 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2520 Apr-Chr9 32406346 32410667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2520 31 688 Receptor kinase-like Gene Family AT5G56890 64.361 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Apr9g2520 PK_Tyr_Ser-Thr 9.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2520 - - ccaj:109808351 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2520 9 32406346 32410667 Apr9g2520 9 32406346 32410667 ECH