Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2510 ATGGATGGCGTCTTCGCCCTCCCTCAAGCCGCCAGAACTGATTTTCTCCGCTCTTTAGTGCACTCTTTTGGCTGCGCTTATGTTTGTTTGTGGAGACATGATTCCGATTTATACAATCGTTTATTCTTCTTGGATGGGTTCTACAATGTAACGAACAACCAATTGCAGCCAAGCACATCTTTAGGGAGTACTTTAGCCAAAACGCTTTTTCACCAATATCAGCGTTTAACATTTGATGTTAATGATGACTGTGTTCCTGGAGTCGCTTTCAGGAACCACCTTCCCTACCTAGAGCTGCAACAATTGGATCTTCTAAGACTCTCATCAACAGAAATTCAAAAACAGTTCATTGAGGAGGCAAGGATTATGACTGCTGTTTTCATGGGGTGCAACAAAGGAGAAATTGAACTTGGGTTCTCATATATGTCTCAAGGTGACATTCAGAGAGCACTTTGGAGTTTATTTCCAGAAGATTTCTCTACACATTGCCAATCAATTCATCAGAAAAATCCACCTTCATCAACATCATCATCTTCTTCTTTCATATCATTATCTACAGGTAGCCCTGAAATAACCCTTGGTGTGGTTCCCGCGATGCCAACCACACAAACTAGCCCACAACAACAAAGAATGGAACCGTTAGCTCAAGTCATTCCAAGTCATTTCCCCACACCAGAGGGCGAAGATGATGCATTGATAAGAGCATTTTTGCATGTTATATCTTCACCTTCTTCTTCAACTTCTCAACAGCATCAACCCCAGCAAAATTTGCCCGATTATACTTCAGTAGTACGTCGAGAAAGTACTGCTTTCAAGAGATATAGATCAGATGTAAGCACAAATGTAACACCCCAAATGGGGTCCAATTTTCAGAGGCAAAGCCTTCTGAATAGATCATTTTCACTCCTTAGAAGCTTAAATTTTGTGAGAATGAGAGAACCCATTCATGTAGCCCCTCCTACTGGTACCCAACTGAATCATATCATATCGGAGCGACGAAGGCGTGAAAAACTCAATGAGAGTTTTCAGGCACTTGGAGCAATACTTCCTCCAGGAACTAAGAAAGACAAAGCGTCGATCCTTACAACAGCAAAGGAAACAATGAAATCATTGATGGATGAAATTGAAAAGCTTTACATAAGCAATCAGCAGTTGATGACATTTTTGTCAGAAAAAGGAGCTCTTAGTACCGAAGAAAACATAGCTATCTCCTCAAATGAAAGATTCAAAGTTGAGGTTTCGGATGTATTGGAATCGAGTTCATCAGAGGGACGAATGGTGGACTTGCAAGTGATCAGTGTGAGAGGAGAAAGTTCTCAAGTTGATATATTGATTCGCTTGTTGAGATTCTTAGAACGACTTCAGAACGTAAGCTTGATTTCCATGGCTGCAAACAACCACATTACACAAAGGGCAGCCATTAATCAATTAACGTTCAGGCTAAGGATTCTCGAGGGAAGTGAATGGGACGAACCTGCCTTCCTGGAAGCTGTCAGAAGAGTGGTTGATGATTTGGTACAATGCCAAGTGGACCAATCATTTTAA 1545 0.4129 MDGVFALPQAARTDFLRSLVHSFGCAYVCLWRHDSDLYNRLFFLDGFYNVTNNQLQPSTSLGSTLAKTLFHQYQRLTFDVNDDCVPGVAFRNHLPYLELQQLDLLRLSSTEIQKQFIEEARIMTAVFMGCNKGEIELGFSYMSQGDIQRALWSLFPEDFSTHCQSIHQKNPPSSTSSSSSFISLSTGSPEITLGVVPAMPTTQTSPQQQRMEPLAQVIPSHFPTPEGEDDALIRAFLHVISSPSSSTSQQHQPQQNLPDYTSVVRRESTAFKRYRSDVSTNVTPQMGSNFQRQSLLNRSFSLLRSLNFVRMREPIHVAPPTGTQLNHIISERRRREKLNESFQALGAILPPGTKKDKASILTTAKETMKSLMDEIEKLYISNQQLMTFLSEKGALSTEENIAISSNERFKVEVSDVLESSSSEGRMVDLQVISVRGESSQVDILIRLLRFLERLQNVSLISMAANNHITQRAAINQLTFRLRILEGSEWDEPAFLEAVRRVVDDLVQCQVDQSF* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2510 514 SMART finulus 328 377 IPR011598 GO:0046983
Apr9g2510 514 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED 1 505 - -
Apr9g2510 514 Pfam Helix-loop-helix DNA-binding domain 326 371 IPR011598 GO:0046983
Apr9g2510 514 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 322 371 IPR011598 GO:0046983
Apr9g2510 514 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 505 IPR044658 -
Apr9g2510 514 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 323 387 IPR036638 GO:0046983
Apr9g2510 514 MobiDBLite consensus disorder prediction 163 184 - -
Apr9g2510 514 CDD bHLH_AtbHLH_like 327 378 IPR045239 -
Apr9g2510 514 Gene3D - 323 396 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2510 Apr-Chr9 32330662 32335004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2510 1 507 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 37.071 2.94e-86 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr9g2510 HLH 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2510 - - gmx:102670282 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2510 9 32330662 32335004 Apr9g2510 9 32330662 32335004 ECH
Apr9g2510 9 32330662 32335004 Apr1g2363 1 33315654 33319839 PCT