Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2494 ATGGAGGAAATATCTTCTAGTGTTGCAGTACCTTTTACACTTGGAGTTGGAAATTTGATTCAAAAGGAGTCTGCGGTGACGACCCACATGGAGATAACTGGGCTAAAGCTTATGGCAAATACGGCAGCAGCTGCTTTAATATTAAATCCTACAGTGGAGTGTTGTCAATCATATTCTGTTGGAAGTGAAAGCCATGCAGATGTTAGTCATCTACAGCACCAAATTACAGTATCTGCTGAGGTAAAGGAGAATCAAGTTGGAGCTGCCCTTGTCTCAGAAATGGTTATTGAATGTGAGAGTAATTGGGTCTTGAAGGAAAGCCATAATCAGGCAAGAAAGGAAGATGAATTCATGTTAGCTGTGGATTTTGAGTGTGGGAAGGAATCTGCATCTATGAAGACTAGTTATGCTGAAATAGGTTCACCAATGGTCATCAAGGTTGATGATGATATTCGTGGTATGTCTAGAATAAACAAGCCATGTCCATCTATAAAGCCAGTGCAAAACACAGTTTCTGTTGCAATGGATATTGCTTGCGAGAATGACAAGTCTGATCCAAAACTACCTGCTGAGATTGTTGATCAGTTGCCAGAGGAGAATAAAACATGGGTAACAAGCAACCAGAATGCTTTGGAATTGAGTAGTTTCCCTCTCTGGGGTTGCTCATCAATTTGTGGAAAGAGACAGGAGATGGAAGATGCTATTGCTATTAAGCCTCAACTTTTACAAGTTCCTTCACAGATTTTAATGAGTCATCATGTGAATGAAAACAAAAGACACTCACTTGCCCACTTTTTTGGGGTTTATGATGGACATGGGGGAATACAGGTTGCTAATTACTGCCAGCAACGTCTTCATTCAGTGTTGATTGAGGAGATAAATGCTACACAATCAAGTTTGGATGAAACAAATGGGAGAGACGATTGGCAGGCCAATTGGAAGAAAGCATTCATCAATTGTTTTCAGAAAGTAGATGATGAGGTTGGAGGAATTGGTGCGGATAATAGTGGAAACAACAGTGATGGATCTGAGTCTAATACTGAACCTGTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAGTCAAACCCACATAGTAGTTGCAAATTGTGGGGATTCAAGAGCTGTTTTGTATCGTGGAAAAGAAGCTATGCCATTATCTGCTGACCACAAACCAGATAGAGATGACGAGCGAGCAAGGATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATATCGAGTACTTGGTGTCTTGGCAATGTCAAGGTCCATAGGTGATAGGTACTTGAAACCATGGATAATTCCAGAACCAGAAATCAATATTGTGCATCGAGAGAAGAACGATGAGTGTCTTATTCTAGCAAGTGATGGCTTATGGGATGTAATGACAAATGAAGAGGTCTGTGAGGTTGCAAGGAAGCGAATCCTTCTTTGGCACAAGAAATATGGCGATGACGGATCAACACGACACGGAGAAGGGGCTGATCCTGCAGCTCAGTCTGCTGCAGAATATCTATCTAAACTTGCCGTCCACAGGGGAAGCGAAGATAACATATCTGTAATAGTGATAGACTTAAAGCCTCAAAGAAAAATTAAGAGAAAAGCATAA 1626 0.4151 MEEISSSVAVPFTLGVGNLIQKESAVTTHMEITGLKLMANTAAAALILNPTVECCQSYSVGSESHADVSHLQHQITVSAEVKENQVGAALVSEMVIECESNWVLKESHNQARKEDEFMLAVDFECGKESASMKTSYAEIGSPMVIKVDDDIRGMSRINKPCPSIKPVQNTVSVAMDIACENDKSDPKLPAEIVDQLPEENKTWVTSNQNALELSSFPLWGCSSICGKRQEMEDAIAIKPQLLQVPSQILMSHHVNENKRHSLAHFFGVYDGHGGIQVANYCQQRLHSVLIEEINATQSSLDETNGRDDWQANWKKAFINCFQKVDDEVGGIGADNSGNNSDGSESNTEPVAPETAGSTAVVAILSQTHIVVANCGDSRAVLYRGKEAMPLSADHKPDRDDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEINIVHREKNDECLILASDGLWDVMTNEEVCEVARKRILLWHKKYGDDGSTRHGEGADPAAQSAAEYLSKLAVHRGSEDNISVIVIDLKPQRKIKRKA* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2494 541 ProSiteProfiles PPM-type phosphatase domain profile. 218 531 IPR001932 -
Apr9g2494 541 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 112 540 - -
Apr9g2494 541 MobiDBLite consensus disorder prediction 331 352 - -
Apr9g2494 541 Pfam Protein phosphatase 2C 222 524 IPR001932 -
Apr9g2494 541 Gene3D - 206 541 IPR036457 -
Apr9g2494 541 PANTHER ALPHABET, ISOFORM E-RELATED 112 540 - -
Apr9g2494 541 ProSitePatterns PPM-type phosphatase domain signature. 265 273 IPR000222 GO:0043169
Apr9g2494 541 CDD PP2Cc 220 531 IPR001932 -
Apr9g2494 541 MobiDBLite consensus disorder prediction 333 352 - -
Apr9g2494 541 SMART PP2C_4 208 529 IPR001932 -
Apr9g2494 541 SUPERFAMILY PP2C-like 213 533 IPR036457 -
Apr9g2494 541 SMART PP2C_SIG_2 245 531 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2494 Apr-Chr9 32206360 32209923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2494 1 541 PP2C-type Phosphatase Gene Family AT1G17550 43.345 2.34e-139 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2494 K14497 - gmx:100789207 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2494 9 32206360 32209923 Apr9g2494 9 32206360 32209923 ECH
Apr9g2494 9 32206360 32209923 Apr1g2381 1 33470905 33475910 PCT