Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2491 ATGGTTTGGTTTCAATGTGAAGTTTGTGGAGACAACCTCAAAAAGCCTAAGTTGGCCAGCCACTTCCGAACTTGCTCCGCTCACAAATTGTCGTGCATTGACTGCGGGGAAATATTTGGGCGTGATACCGTTCAAGATCACACACAGTGTATTACGGAAGCGGAAAAGTATGGTCCTAAGGGCCAAGGGAAAACTTTGAACGTTGCAACTGCCAAGCCTAACCAGGATAACAAGCAAAGAGCTGAAGTTGATATTAATGTGGGGTTATCTGAGCATCCTCCATGGTTCTGCAGTCTTTGCAATACAAAAGCTACAAGTAAGCAAACACTTCTTCTCCATGCTGATGGAAAGAAACACAGGGCAAAGGCCCGAGCGTTTCATGCTGCAAATCAACAGCCTTCCCGGACAGACAAATCTGCCCCTGATGCAAAGGTTGCTGTGGGGACTCCTAATAATGACAAAATTGGGGAGCTGCCAAAATTGCACGAGTCTTCTAAACAAAATAACTCAAACACAGGGAATGAAATTTCTTCAGCAAAGAAAAAGAGAAAGCTTGAAGCGTTGGAGGATGACCTTATTAAACAAGGCAAGAATGACACTTCAGTTGACATGGGAAATGGGGAAGTAATTCAGGGTGAAGCAACTGGAGAGAGCAACTTGAAGAAAGAAGGCATAGTGGAATCTCACTGTACTAGTGCTGTCAAAAACAAAATAAAATGGAAGAAGTTTATCAAGTCAGCCTTGAAATCTCATCCTGATGGAATTTTGAAGATGAAGAAACTGAGAAAAGTTGTCCTCAAAGAACTGCAGGAGTCTGGAATTGTAGTGGATGAAGCTGAATTTAGTGAGGCGCTTGAGAAGAAGATCAATTCCAGCTCCAGATTTGCAATTGAGAACAAGTATGTGCGTTTGCTGGCCAAAGATTGA 927 0.4293 MVWFQCEVCGDNLKKPKLASHFRTCSAHKLSCIDCGEIFGRDTVQDHTQCITEAEKYGPKGQGKTLNVATAKPNQDNKQRAEVDINVGLSEHPPWFCSLCNTKATSKQTLLLHADGKKHRAKARAFHAANQQPSRTDKSAPDAKVAVGTPNNDKIGELPKLHESSKQNNSNTGNEISSAKKKRKLEALEDDLIKQGKNDTSVDMGNGEVIQGEATGESNLKKEGIVESHCTSAVKNKIKWKKFIKSALKSHPDGILKMKKLRKVVLKELQESGIVVDEAEFSEALEKKINSSSRFAIENKYVRLLAKD* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2491 308 SUPERFAMILY beta-beta-alpha zinc fingers 86 130 IPR036236 -
Apr9g2491 308 Gene3D - 1 50 - -
Apr9g2491 308 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 305 IPR039999 GO:0003677
Apr9g2491 308 Gene3D Classic Zinc Finger 89 131 - -
Apr9g2491 308 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Apr9g2491 308 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Apr9g2491 308 MobiDBLite consensus disorder prediction 126 181 - -
Apr9g2491 308 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Apr9g2491 308 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Apr9g2491 308 Pfam Zinc-finger of C2H2 type 95 119 - -
Apr9g2491 308 MobiDBLite consensus disorder prediction 162 176 - -
Apr9g2491 308 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Apr9g2491 308 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2491 77 190 C2H2 Transcription Factor Family AT2G19380 42.735 3.09e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2491 K15263 - gmx:100790703 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2491 9 32188033 32191166 Apr9g2491 9 32188033 32191166 ECH