Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2482 ATGCTTACGTGTATAGCTCGTCCTAAGAAACCGGGGAACGACTCAGTGAGTAAGCCCGATGATTCCGATCCCAACAACGCGACTAAAACGCAACCCGTCAAATCCCTAACTTCTCAGATAAAGGATATGGCGTTGAAGGCGTCGGGGGCGTACAAGCATTGTGCTCCCTGCACGGGGCCGCCGATGCAGGGACGGGTGAGGAGCAATACCGAGTCGGACGCGGACTCGGATCGGTTCCGATGGTCTTACAGAAGAACAGGGAGTTCGAGTTCGACGACGACGAGGACGTGGGGGAAGGAGATGGAGGCGAGGCTAAAGGGGATTTCGAGCGGGGAGGGGACGCCGAACTCCGCCAGCGGGCGGAGGACAGAGCCGGTGGTACTGTTCGTCGAAGAAAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGTGTTTTGATTACGTTCGTGTCGTTGCCACGTGGCGGGAACGATCTGAAACGCATACGATTCAGTCGAGAGATGTTCAATAAATGGCAAGCTCAAAGGTGGTGGGCAGAGAACTACGACAAGGTCATGGAACTTTACAATGTTCAAAGATTTAACCGCCAAGCATTCCCTCTTCCAACGCCACCAAGATCTGAAGACGAGAGCTCAAAGCTTGAATCAGCAGAAGACAGCCCTGTAACACCTCCACTGACCAGGGAACGGTTACCTCGTAATATGTACCGTCCAACAGGGTCGAATGGTATGAACTCAACCCCAAAAGTCTCCACCATCAGTGCGGCCAAGACTGAGATATCATCCATGGATGCTTCTATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCAGGTGATTTATCATTCAGCAATGCTAGTGATTTGGACACTGAATGGGTTGAGCAGGATGAAGCTGGGGTTTACATTACCATCAGAGCATTGCCAGGTGGCAAAAGGGAGCTCAGACTAGTCAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAGGAAAACCGTGCCAGAATACATGAACAATACTTGTGA 1044 0.522 MLTCIARPKKPGNDSVSKPDDSDPNNATKTQPVKSLTSQIKDMALKASGAYKHCAPCTGPPMQGRVRSNTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRTEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNRQAFPLPTPPRSEDESSKLESAEDSPVTPPLTRERLPRNMYRPTGSNGMNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSFSNASDLDTEWVEQDEAGVYITIRALPGGKRELRLVRFSREKFGEMHARLWWEENRARIHEQYL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2482 347 Pfam Transcription factor regulating root and shoot growth via Pin3 136 190 IPR013591 -
Apr9g2482 347 Pfam Transcription factor regulating root and shoot growth via Pin3 292 346 IPR013591 -
Apr9g2482 347 MobiDBLite consensus disorder prediction 1 75 - -
Apr9g2482 347 Pfam Transcription factor BRX N-terminal domain 26 57 IPR027988 -
Apr9g2482 347 MobiDBLite consensus disorder prediction 18 42 - -
Apr9g2482 347 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 347 - -
Apr9g2482 347 MobiDBLite consensus disorder prediction 199 250 - -
Apr9g2482 347 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 347 IPR044532 -
Apr9g2482 347 ProSiteProfiles BRX domain profile. 292 347 IPR013591 -
Apr9g2482 347 MobiDBLite consensus disorder prediction 264 286 - -
Apr9g2482 347 ProSiteProfiles BRX domain profile. 136 191 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2482 Apr-Chr9 32116743 32121424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2482 1 347 Major Intrinsic Protein MIP AT1G31880 46.978 6.73e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2482 - - gmx:100794109 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2482 9 32116743 32121424 Apr9g2482 9 32116743 32121424 ECH
Apr9g2482 9 32116743 32121424 Apr1g2391 1 33560344 33566419 PCT