Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2479 ATGGGTGATTTTCAAGCCCCCTTCACAGTGTCACCCCCTCCTTTTCCCTCTTCCCCAGATAAGTCCAACATACCCTTTTTATATTATGGCCTAGTACTGGTGGGAATTGCAGTCATAGCATTGGCCCTTTACAATTGTATTGTCATGAAACAAAGTAGGGGGCGCCATATGCAATCACAGACTGCAAGGCCAAATGGGTTGGTCGAGGTTGTCATAGAAAGTAACGTTGAGAACTGCCAAAGGAACTTGCTTTTAAGCTTCAAGTACAAGAAAGAAGCAGGAAAAGAAGGTGGTGGGGAGGATTATGAGTGCCCAGTTTGCTTATCGGGTTTTGAAGAAGGGGAAGAAGTGAGGAAGCTACCGCGTTGCGAACACTACTTCCACGCTCCATGCATAGACATGTGGCTTTACTCTCACTTCGATTGCCCAATTTGTCGAACACCCGTTGGTCCATTCTGCCACCGTGTCCCGCCGGAGAATTCTCGTCACTGA 492 0.4756 MGDFQAPFTVSPPPFPSSPDKSNIPFLYYGLVLVGIAVIALALYNCIVMKQSRGRHMQSQTARPNGLVEVVIESNVENCQRNLLLSFKYKKEAGKEGGGEDYECPVCLSGFEEGEEVRKLPRCEHYFHAPCIDMWLYSHFDCPICRTPVGPFCHRVPPENSRH* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2479 163 SUPERFAMILY RING/U-box 99 154 - -
Apr9g2479 163 SMART ring_2 104 145 IPR001841 -
Apr9g2479 163 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Apr9g2479 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 151 IPR013083 -
Apr9g2479 163 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 152 IPR044675 -
Apr9g2479 163 PANTHER RING-H2 FINGER PROTEIN ATL52-LIKE 11 152 - -
Apr9g2479 163 Pfam Ring finger domain 103 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2479 Apr-Chr9 32103729 32104220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2479 31 149 C3H Transcription Factor Family AT5G17600 35.659 9.88e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2479 - - gmx:102668213 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2479 9 32103729 32104220 Apr9g2479 9 32103729 32104220 ECH
Apr9g2479 9 32103729 32104220 Apr1g2395 1 33590743 33591300 PCT