Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2458 ATGAAAATCACACTGAGATCGATCTTCCCTAGTTGTTATAAGGGTGAATACGTGTCACCCTCACCAAAGCCCACCAAGGTCGTGGCTACAAAGGGTGGTTCTTCTTCCAACAGGGTCTCTATCACGGATTTGAGTTATCCAAGTTCCACGTTTTCTGAGGATCTGTCGGTTTCTCTAGCAGGGTCTAACCTCCATGTTTTCACACTTGCTGAGCTCAAGATCATCACGCAGAGCTTCTCTTCGAGTAACTTTCTCGGAGAAGGAGGGTTCGGACCTGTGCATAAGGGGTTCATCGATGACAAGGTTAGGCCAGGTCTCGAGGCTCAACCTGTTGCTGTTAAGCTCTTGGACTTGGATGGTTCTCAGGGCCATAAAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTAAGGCATCCACATCTTGTCAAGTTGATTGGATATTGCTGTGAAGAAGAACACAGGCTTCTGGTGTATGAATATTTACCACGAGGAAGCTTAGAGAATCAGCTATTTAGAAGATACTCGGCATCGTTACCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTCTAGCCTTTTTACATGAAGCTAAGAAACCAGTCATCTATAGAGATTTCAAAGCTTCCAACATCTTGTTGGATTCTGATTATAATGCAAAGCTCTCAGATTTTGGCTTGGCAAAAGATGGCCCTGAAGGAGATGACACACATGTTTCAACAAGGGTCATGGGCACCCAAGGCTACGCGGCCCCAGAATACATTATGACAGGACACTTGACAGCAATGAGTGATGTGTATAGTTTTGGAGTTGTCCTCTTAGAGCTTCTAACAGGTAGAAGGTCAGTGGACAAGGGGCGCCCACCTAGAGAACATAACCTGGTGGAATGGGCCAGGCCCGTCTTGAATGATCCGCGGAAACTTGGTAGAATAATGGATCCAAGGCTTGAAGGTCAATATTCTGAGATGGGGGCAAGAAAAGCAGCTGCATTGGCTTATCAATGTCTAAGCCACAGGCCAAGGAGTAGACCCTCAATGACCACAGTGGTTAAGATTCTTGAGCCTCTTAAGGATTTTGATGACATTCCCATTGGACCCTTTGTTTACACGGTTCCAACTGATAATGGAGTGAAAGAGAGTGAAACACCAAAGGAGAGGAAAAGGGAAAATGGTCACCATCACCGTAGCCATCATCACACTAATGCCCATAAGCATCATGATAACAGTGAAATGCATAAAGATGCAAATGAAAGTGAAGCACCTAGGGAGAGAAAGAGGGAAAATGGTCAACATCACCGAAATCACCATCGCCACAATGGGCATAGGCCACATCCACTTAAGGCGCCAAAGCCACAGAATGATGAACACCAAAATGGTAGAAGAAGTGGGTCAAACTCGCCTGATAGCATTGCATCATAA 1428 0.4545 MKITLRSIFPSCYKGEYVSPSPKPTKVVATKGGSSSNRVSITDLSYPSSTFSEDLSVSLAGSNLHVFTLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKVRPGLEAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLAFLHEAKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKGRPPREHNLVEWARPVLNDPRKLGRIMDPRLEGQYSEMGARKAAALAYQCLSHRPRSRPSMTTVVKILEPLKDFDDIPIGPFVYTVPTDNGVKESETPKERKRENGHHHRSHHHTNAHKHHDNSEMHKDANESEAPRERKRENGQHHRNHHRHNGHRPHPLKAPKPQNDEHQNGRRSGSNSPDSIAS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2458 475 MobiDBLite consensus disorder prediction 367 475 - -
Apr9g2458 475 MobiDBLite consensus disorder prediction 461 475 - -
Apr9g2458 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Apr9g2458 475 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 25 396 - -
Apr9g2458 475 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
Apr9g2458 475 ProSiteProfiles Protein kinase domain profile. 79 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2458 475 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Apr9g2458 475 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Apr9g2458 475 PANTHER OS01G0588500 PROTEIN-RELATED 25 396 - -
Apr9g2458 475 SUPERFAMILY Protein kinase-like (PK-like) 54 357 IPR011009 -
Apr9g2458 475 MobiDBLite consensus disorder prediction 406 430 - -
Apr9g2458 475 MobiDBLite consensus disorder prediction 431 448 - -
Apr9g2458 475 CDD STKc_IRAK 85 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2458 Apr-Chr9 31958116 31960778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2458 65 391 Glycoside Hydrolase AT3G07070 50.299 2.77e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr9g2458 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2458 - - gmx:100799411 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2458 9 31958116 31960778 Apr9g2458 9 31958116 31960778 ECH
Apr9g2458 9 31958116 31960778 Apr1g2415 1 33760344 33762630 PCT