Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2447 ATGGCCGCTGTTCGCTTCCTTTTCTTCCTCATTCTCTCTCTCTCCCTCTCTCTCTCTCCCTCTCTCTCCCTCTCAGAATCCGAAGCTCTCCTAAAACTCAAACAATCCTTCACCAACTCCCAACCCCTCTCCTCTTGGCTCCCAAACCAGAACCCTTGCACTTCCAAGTGGGTCGGCGTTATCTGCTTCAACAACATCATCACCAGCCTCCATCTTGCCGACTTGGGCCTCTCTGGCACCATTGACATTGACTCTATCCTAGAGATCCGCACCCTTCGATCCATTAGCTTCGTCAACAACTCCTTCACTGGCCCAATTCCCAGCTTCAACAAACTCGGAACTCTCAAGGCTCTTTACCTAACTCATAACCAGTTCTCTGGACCCATTCCTTCTGATTTCTTTTCCCATCTAGCTTCTTTGAAGAAAGTATGGATCTCCGACAACAAATTCTCCGGCAACATACCCGACTCGTTAACCACGCTTCGTTTTCTCGTCGAGTTGCACCTCGAGAACAACGAGTTCTCTGGCCCAATCCCCCCACTCACGCAGGATATCAAATCCTTGGACATGTCGAACAACAAGTTAGAAGGGGAGATTCCTAGTACCATGTCGAGGTTCGACGCGAATTCGTTCTCCGGCAACGATGGGCTCTGCGGAAAGCCTCTGGATGAAGAGTGTGGCGCCGCGGAAAGCCCTGAAGGTGGACAAGGGTCGGGTTGGGGAATGAAGGTGATTATAATTCTCATTATTGCCGCCGTTTTGGCGGCGGTTTTCATGGTGGCGAAGGCGAAGCGTGGACACGAGGATGATTTCAGCGTGACGAGTAGGGGGAACGCGGATGAGGTGGTGCAGGTGCACGTGCCGAGTTCCAACCACAGCAGGGCTTCAGAAGGAAGCAAAAAGGAATCGAAGAAAGGGTCGTCTCGTAGCGGGATGGGTGACCTTGTTATGGTGAATGATGAGAAGGGTGTGTTTGGGTTACCCGATTTGATGAAAGCTGCTGCTGAGGTTTTAGGAAATGGTGGGTTAGGTTCGGCTTATAAAGCTGCCATGGCTAATGGGTTGTCTGTGGTGGTTAAGCGTATGCGCGAGATGAATAAAGTAAGCAGAGATATCTTTGATGCTGAGATGAGACGCTTTGGGAGACTCAGAAACAGTAACATTATGACGCCTTTGGCCTACCATTACCGAAGGGAGGAGAAGTTGTTTGTCACCGAATACATGCCCAAAGGAAGCTTGTTATATGTCTTGCATGGTGATAGAGGAATGAGTCATGCAGACCTGAGCTGGCCCATCCGTTTGAACATTGTGAAGGGAATTGCACGAGGGTTGGGCTTTCTATATTCTGAATTTTCTACCGAAGACTTGCCACATGGAAACCTTAAATCCAGCAATGTTCTACTAGCTGACAATTACGAGCCACTCCTAAGCGACTTTGCCTTTCATGCACTCATCAACCCAAACTACGCCATGCAAACAATGTTTGCCTACAAAACTCCTGATTACGTAATTTACCAGAAAATATCACAGAAAACGGACGTTTACTGCCTTGGAATCATCATTCTGGAAATCATCACTGGAAAATTCCCTTCTCAGTATCACAGTAATGGCAAGGGTGGGACCGATGTAGTGCAATGGGTCTTCACTGCAATTTCTGAGAGAAGAGAAGCAGAGTTAATTGATCCAGAGTTAACAAGCAATCACTCAAACTCAACCAATCAAATGCTGCTACTTCTCCAAGTTGGGGCTGCTTGCACGGAGAGCAACCCCGAACAACGACTTACCATGAAAGAAGCCATTAGGAGGATAGAGGACGTTCAGGTATAA 1827 0.4822 MAAVRFLFFLILSLSLSLSPSLSLSESEALLKLKQSFTNSQPLSSWLPNQNPCTSKWVGVICFNNIITSLHLADLGLSGTIDIDSILEIRTLRSISFVNNSFTGPIPSFNKLGTLKALYLTHNQFSGPIPSDFFSHLASLKKVWISDNKFSGNIPDSLTTLRFLVELHLENNEFSGPIPPLTQDIKSLDMSNNKLEGEIPSTMSRFDANSFSGNDGLCGKPLDEECGAAESPEGGQGSGWGMKVIIILIIAAVLAAVFMVAKAKRGHEDDFSVTSRGNADEVVQVHVPSSNHSRASEGSKKESKKGSSRSGMGDLVMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMANGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNSNIMTPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGMSHADLSWPIRLNIVKGIARGLGFLYSEFSTEDLPHGNLKSSNVLLADNYEPLLSDFAFHALINPNYAMQTMFAYKTPDYVIYQKISQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAISERREAELIDPELTSNHSNSTNQMLLLLQVGAACTESNPEQRLTMKEAIRRIEDVQV* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2447 608 Pfam Protein kinase domain 336 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2447 608 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Apr9g2447 608 SUPERFAMILY Protein kinase-like (PK-like) 336 602 IPR011009 -
Apr9g2447 608 Gene3D Phosphorylase Kinase; domain 1 338 408 - -
Apr9g2447 608 MobiDBLite consensus disorder prediction 286 314 - -
Apr9g2447 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 608 - -
Apr9g2447 608 Gene3D Ribonuclease Inhibitor 25 136 IPR032675 -
Apr9g2447 608 PANTHER LRR RECEPTOR-LIKE KINASE 5 608 - -
Apr9g2447 608 Gene3D Ribonuclease Inhibitor 137 227 IPR032675 -
Apr9g2447 608 ProSiteProfiles Protein kinase domain profile. 332 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2447 608 Gene3D Transferase(Phosphotransferase) domain 1 409 608 - -
Apr9g2447 608 SUPERFAMILY L domain-like 23 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2447 Apr-Chr9 31863155 31865253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2447 1 608 Receptor kinase-like Gene Family AT3G42880 50.943 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr9g2447 Pkinase 8.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2447 - - gmx:100788667 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2447 9 31863155 31865253 Apr9g2447 9 31863155 31865253 ECH
Apr9g2447 9 31863155 31865253 Apr1g2428 1 33892339 33895229 PCT