Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2431 ATGGATGGTGCTGGAGGGTCCAAATTGAGTGGGATTAAGCAGATTGCAAGACTAAAGGAAATGTTTCAGAAGTGGCAAACTGTTACCTTGGGCTCAAAAGAGTCAAATGATCATTCTAGGGTGAATCATGGGGGCATATCACCAATGATTAACAAAAGGCTAACAAATGTCATGTATTGTGACTCGGATGATGATAGCTGTCACAGCCCTAAAGCACCACATGATGTTCCCAAAGGATATTTAGCTGTCTATGTAGGGCCAGAGCTTCGAAGGTTTATCATTCCAACAAGTTACCTAAGCCACTCTTTGTTCAAGGTGTTGCTGGAAAAGGCTGCAGAAGAATTTGGGTTTGACCAGAGTGGTGGACTCACTATTCCATGTGAGATTGAGACTTTTAAATACCTATTGAATTGCATGGAGAACCATGATGACAGCTCCACACTTCTCACATACGTTCTAAGGCATTCTGTTGATTTTTCTATTTCGGAAACAAGGGAAGTCTGCAAACACAGGTACTACGGAATAATAAGTAATTACTCTGATCTTTATAGAGGTGAAGTTATAGAGCTGGTTTCAAGTGTAAAAGAGGTTTGCCCATCTTCTTTGTTTTGA 612 0.4069 MDGAGGSKLSGIKQIARLKEMFQKWQTVTLGSKESNDHSRVNHGGISPMINKRLTNVMYCDSDDDSCHSPKAPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENHDDSSTLLTYVLRHSVDFSISETREVCKHRYYGIISNYSDLYRGEVIELVSSVKEVCPSSLF* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2431 203 Pfam Auxin responsive protein 59 138 IPR003676 GO:0009733
Apr9g2431 203 PANTHER SMALL AUXIN-UP RNA-RELATED 7 149 - -
Apr9g2431 203 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2431 Apr-Chr9 31733250 31734151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2431 1 146 Calmodulin-binding Proteins AT3G43120 67.550 1.28e-70 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2431 K14488 - gmx:100795275 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2431 9 31733250 31734151 Apr9g2431 9 31733250 31734151 ECH
Apr9g2431 9 31733250 31734151 Apr1g2443 1 34076878 34079121 PCT