Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2430 ATGGCTCAGAGGAAAGTGGGTCACCTTGAAATTAGTGGGGCAAAATTTTTTGCTTCATTAACACTACTCGTTCTCCACCTTGTCCAAGCAACCCTTTTACCTCACATTTCGGAGCATGCACACCGCAGTGACGGCGCGTTTAAAATCGTGAGGGTTCGCAAAGACGGTGCAGGGGACTTCAGGACGGTGACGGAGGCCGTTAACAGCATTCCGTCAGGGAACAAACGGCGAGTGGTGGTGTGGATCGGCATGGGCGAGTATAGGGAGAAGATAACGATTGAAAGGTCGAAGGCGTTTGTTACGTTTTATGGAGAAAGAAATGGGAACGACAATGACATGCCCATCATAACGTACCACGCAACGGCATTGCAGTATGGAACAGTGGATAGCGCCACCGTCGCTGTTGACTCCGATTATTTTGTTGCTGTCAATGTTGCCTTTGTGAACTCGTCTCCTATGCCAGATGAAAACAGTGTTGGAGGACAAGCATTAGCCATGAGGATATCGGGGGACAAGGCTGCATTCTACAACTGCAAGTTCATTAGCTTTCAAGACACTTTGTGCGATGACAAAGGCAGGCATTTTTTCAAGGATTGCCACATTCAAGGCACCTATGATTTCATCTTCGGAAATGCAAAATCTATCTACTGGAGAAGTACCATAGAATCGGTTGCAAAAGGTTTGAGTGTTATCACAGCACAAGGTAGAGAAAGCAGGGCAGAAGACACTGGTTTCAGTTTCGTGCACTGCAACATAACGGGAAGTGGTAACAGGAACACATACCTTGGGCGTTCTTGGAAAAGGAGCCCCAGGGTTGTGTTTGCCTACACTTACATGGGCTCCCTCATCAATAGCCGAGGATGGTTCCGCAGACACCCTAAAGCCAAGCACAAACTCAAGCACAACCGGACAATCTTCTACGGAGAATATAAATGCATGGGACCAGGAGCTGCTTCCTCTGGCCGCGTAAAATTTTACAGAAAACTATCCTACAGACAGGCAAAGCCCTTCATGAGCATGGCTTTTATTCATGGAGGAAAGTGGGTTGTCCCACCTCCCAAGCTGTGA 1068 0.4785 MAQRKVGHLEISGAKFFASLTLLVLHLVQATLLPHISEHAHRSDGAFKIVRVRKDGAGDFRTVTEAVNSIPSGNKRRVVVWIGMGEYREKITIERSKAFVTFYGERNGNDNDMPIITYHATALQYGTVDSATVAVDSDYFVAVNVAFVNSSPMPDENSVGGQALAMRISGDKAAFYNCKFISFQDTLCDDKGRHFFKDCHIQGTYDFIFGNAKSIYWRSTIESVAKGLSVITAQGRESRAEDTGFSFVHCNITGSGNRNTYLGRSWKRSPRVVFAYTYMGSLINSRGWFRRHPKAKHKLKHNRTIFYGEYKCMGPGAASSGRVKFYRKLSYRQAKPFMSMAFIHGGKWVVPPPKL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2430 355 PANTHER PECTINESTERASE 41 354 - -
Apr9g2430 355 Gene3D - 48 352 IPR012334 -
Apr9g2430 355 Pfam Pectinesterase 51 345 IPR000070 GO:0030599|GO:0042545
Apr9g2430 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 41 354 - -
Apr9g2430 355 SUPERFAMILY Pectin lyase-like 49 349 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2430 Apr-Chr9 31727836 31730958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2430 43 355 Carbohydrate Esterase AT5G07410 48.882 8.71e-115 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2430 K01051 - gmx:100790786 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2430 9 31727836 31730958 Apr9g2430 9 31727836 31730958 ECH