Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2418 ATGACACACCAGCATAGGCACAAACCTTACACAATGGCATCAAGAAAAACCTTTAACCAATTGTTGCTAATGAGTTGCTTTGTTTTGCTGGGTCAATGTGGTAGGATACATAACACAGAAGGAGGAGAGGATTTGGTGACAGCAACCTGCAAACACACCCTTCATTTTCAAGTATGCATTTCTTCCTTGAAATCAGTTCCTGGTAGCAAGACATCAAATCCCAAAATGCTAGCTTATATTGCATTAAATCTTAGCACAACATATGCTGCAAAGACTTTGTCCTATATTTATGAGCTAAAGTCTTCTTTTGCTGCCAATGGCCCCAACAACAACATTTACGTGTCCCGTTGCTTAAGTGATTGTGCTGAGGAATACTCAGAAGCCATAGAGAATTTGCAGAACTCAGCTCAAGCACTTCTCAATGGAGAATATGACAAAGTGGATACATTGGTCTCTGCTGCTATGTCAGATGCTGAGACATGTGAGGATGGTTTCAAGGACATGCTCAGTGAGGACAATGATTCTACCTTTCCTCTTACCGAGTACAACCGTTACTTCTCTGAACTCTGTAGCAATGCTCTTGCCATTAGAAAATTGTTAGTTTAA 606 0.4059 MTHQHRHKPYTMASRKTFNQLLLMSCFVLLGQCGRIHNTEGGEDLVTATCKHTLHFQVCISSLKSVPGSKTSNPKMLAYIALNLSTTYAAKTLSYIYELKSSFAANGPNNNIYVSRCLSDCAEEYSEAIENLQNSAQALLNGEYDKVDTLVSAAMSDAETCEDGFKDMLSEDNDSTFPLTEYNRYFSELCSNALAIRKLLV* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2418 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 201 IPR035513 -
Apr9g2418 201 PANTHER OS05G0360900 PROTEIN 36 200 - -
Apr9g2418 201 CDD PMEI-like_1 45 200 - -
Apr9g2418 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 200 IPR035513 -
Apr9g2418 201 Coils Coil 122 142 - -
Apr9g2418 201 SMART PMEI_2 41 196 IPR006501 GO:0004857
Apr9g2418 201 TIGRFAM PME_inhib: pectinesterase inhibitor domain 20 200 IPR006501 GO:0004857
Apr9g2418 201 Pfam Plant invertase/pectin methylesterase inhibitor 44 196 IPR006501 GO:0004857
Apr9g2418 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 36 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2418 Apr-Chr9 31603332 31606796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2418 45 198 Carbohydrate Esterase AT1G53830 26.582 5.15e-08 50.4