Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2416 ATGGCTACTTCATCTCCTAAACTCTTCCTCCTTCTCTTAACAATCTTCTTTTCATTCTCACATACATGGGCAATCAACTCCTCCAACTCCAATGCTTCCACAGCAACATTGCATGCAAACCTCTCTTCCTTAAAATCATTTTGCAGAACCAGACCATACCCTGAAGTTTGCTTCAATTCATCGAAGCTTTCCATCTCAATAAACATAAATCCAAATATCATCAGCACCCTTCTTCAGTCCCTAGAAGTAGCAATATCTGAAGCCACAAAACTATCTGATCTATTCAACAAAGCGGGACCCTCCAACATCATAGAGAACAAAATAGGTGCAGTCCAGGACTGTAAAGAACTTCAACAATCCACCTTAGCTTCCTTAAAAAGATCATTATCTGGGATTCGTTCCCAAGATTCTAGAAAGCTAGTTGATGCAAGAACTTACCTCAGTGCAGCCCTTACCAATAAAAACACATGCCTTGAAAGCATAGATTCTGCTTCAGGTACCCTTAAGCCAGTTCTGGTGGATTCTGTGATCAACTCTTACAAGCATGTCAGTGATTCTCTTTCAATGGTCCCTAAGCCTCAAATGAAGGCTTCCAGTTCCAAAGAACACAAGAATAGGCGTTTGATGAGTGCTCCAACGTGGTTTTTAAGAAAAAACCACCGTCTCTTGCTAAGTTCCAATGAAGTGCTTGTTGTGGCTGCAGATGGGACTGGGAACTTCAGTACAATCACTGAAGCTATCAATTTTTCTCCCAATAACAGTTTAGATAGGACAGTGATCTATGTCAAAGAAGGGACTTACGAGGAGAATGTTGAAATCCCAAGTTATAAGACTAATATTGTTCTGCTTGGCGACGGAAAAGATGTCACTGTCATTACTGGCAGCAGAAGTGTCATCGGCTGGACCACTTTCAGATCTGCTACTCTAGCGGTTTCTGGTGATGGCTTTCTGGCACGTGATATAGCTTTTGAGAACAAGGCAGGGCCAGAGAAGCATCAAGCAGTTGCCTTAAGAGTGAATGCAGACTTCACTGCTTTTTATAGGTGTGCCATGTATGGTTACCAAGACACTCTTTACGTTCACTCCTTTAGACAATTCTATAGAGAGTGTAACATATATGGGACCATAGATTTCATATTTGGAAATGCAGCTGTGGTTTTACAAGCATGTAGCATTGTGTCTAGGATGCCATTGCCTGGCCAATTCACTGTAATTACTGCACAATCCAGAGATTCCCCAGATGAAGACACTGGCATCTCAATCCAAAACTGCTCAATTCTAGCTACCACTGATTTGTATTCCAACTCTGCTAGTGTTAAGAGCTACCTCGGTAGGCCATGGAGGGCCTATTCTCGTACCGTTTACCTTGAGTCCTACATTGATGTCTTTATTGACCCAATGGGGTGGACAAAGTGGTCTGATGATGGTCAAGGTTTGGACACTTTGTATTATGGAGAGTATGCAAATTATGGGTCTGGTTCAGGGACAGATAACCGAGTGACATGGCTTGGGTACCATTTAATGGATTATAGTAGTGCCTACAACTTTTCAGTCTCAGAGTTCATCATTGGTGATGCTTGGCTTGGGTCTACTTCATTCCCTTATGATGATGGGATTTAA 1620 0.421 MATSSPKLFLLLLTIFFSFSHTWAINSSNSNASTATLHANLSSLKSFCRTRPYPEVCFNSSKLSISININPNIISTLLQSLEVAISEATKLSDLFNKAGPSNIIENKIGAVQDCKELQQSTLASLKRSLSGIRSQDSRKLVDARTYLSAALTNKNTCLESIDSASGTLKPVLVDSVINSYKHVSDSLSMVPKPQMKASSSKEHKNRRLMSAPTWFLRKNHRLLLSSNEVLVVAADGTGNFSTITEAINFSPNNSLDRTVIYVKEGTYEENVEIPSYKTNIVLLGDGKDVTVITGSRSVIGWTTFRSATLAVSGDGFLARDIAFENKAGPEKHQAVALRVNADFTAFYRCAMYGYQDTLYVHSFRQFYRECNIYGTIDFIFGNAAVVLQACSIVSRMPLPGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYSNSASVKSYLGRPWRAYSRTVYLESYIDVFIDPMGWTKWSDDGQGLDTLYYGEYANYGSGSGTDNRVTWLGYHLMDYSSAYNFSVSEFIIGDAWLGSTSFPYDDGI* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2416 539 CDD PMEI-like_3 46 193 - -
Apr9g2416 539 Gene3D - 225 539 IPR012334 -
Apr9g2416 539 SMART PMEI_2 39 189 IPR006501 GO:0004857
Apr9g2416 539 PANTHER PECTINESTERASE 9 538 - -
Apr9g2416 539 Pfam Plant invertase/pectin methylesterase inhibitor 43 189 IPR006501 GO:0004857
Apr9g2416 539 PANTHER PECTINESTERASE 9 538 - -
Apr9g2416 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 191 IPR035513 -
Apr9g2416 539 Pfam Pectinesterase 230 525 IPR000070 GO:0030599|GO:0042545
Apr9g2416 539 ProSitePatterns Pectinesterase signature 2. 372 381 IPR033131 -
Apr9g2416 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 192 IPR035513 -
Apr9g2416 539 SUPERFAMILY Pectin lyase-like 226 536 IPR011050 -
Apr9g2416 539 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 191 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2416 Apr-Chr9 31598473 31600410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2416 36 539 Carbohydrate Esterase AT2G26440 65.067 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2416 - K01051 pvu:PHAVU_003G126600g 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2416 9 31598473 31600410 Apr9g2416 9 31598473 31600410 ECH