Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2412 ATGGGATGGCCAGAGAAGCATCAAGCAGTTACCTTGAGAGTGAACGCAGACTTCACTGCTTTTTATAGGTGTGCCATGTATGGTTACCAAGACACTCTTTACGTTCACTCCTTTAGACAATTCTATAGAGAGTGTAACATATATGGGACCATAGATTTCATATTTGGAAATGCAGCTGTGGTTTTACAAGCATGTAGCATTGTGTCTAGGATGCCATTGCCTGGCCAATTCACTGTAATTACTGCACAATCCAGAGATTCCCCAGATGAAGACACTGGCATCTCAATCCAAAACTGCTCAATTCTAGCTACCACTGATTTGTATTCCAACTCTGCTAGTGTTAAGAGCTACCTCGGTAGGCCATGGAGGGCCTATTCTCGTACCGTTTACCTTGAGTCCTACATTGATGTCTTTATTGACCCAATGGGGTGGACAAAGTGGTCTGATGATGGTCAAGGTTTGGACACTTTGTATTATGGAGAGTATGCAAATTATGGGTCTGGTTCAGGGACAGATAACCGAGTGACATGGCTTGGGTACCATTTAATGGATTATAGTAGTGCCTACAACTTTTCAGTCTCAGAGTTCATCATTGGTGATGCTTGGCTTGGGTCTACTTCATTCCCTTATGATGATGGGATTTAA 645 0.4279 MGWPEKHQAVTLRVNADFTAFYRCAMYGYQDTLYVHSFRQFYRECNIYGTIDFIFGNAAVVLQACSIVSRMPLPGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYSNSASVKSYLGRPWRAYSRTVYLESYIDVFIDPMGWTKWSDDGQGLDTLYYGEYANYGSGSGTDNRVTWLGYHLMDYSSAYNFSVSEFIIGDAWLGSTSFPYDDGI* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2412 214 Gene3D - 2 214 IPR012334 -
Apr9g2412 214 PANTHER PECTINESTERASE 4 213 - -
Apr9g2412 214 SUPERFAMILY Pectin lyase-like 4 211 IPR011050 -
Apr9g2412 214 PANTHER PECTINESTERASE 4 213 - -
Apr9g2412 214 Pfam Pectinesterase 4 200 IPR000070 GO:0030599|GO:0042545
Apr9g2412 214 ProSitePatterns Pectinesterase signature 2. 47 56 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2412 Apr-Chr9 31572111 31573658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2412 4 214 Carbohydrate Esterase AT2G26440 72.512 8.82e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2412 - K01051 aprc:113874714 452.595