Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2405 ATGGCTGGTGTGAACTCCGAGCCTGAAGGATGGAAACTTTTTCCTTCTCTTATGGATTCTGCTGCTGATAGTAACGTTGATGGAAGGAGTGACAAAAACTTGAGTAATGATGGGTTGGTGATGCATTTCTCTTCTGCCAGGCCAGTGCCAACATCTGGACAGAAAGCAGTGATTCCAAATACAACTCAGTTTACCATCTTCTATAAGGGAAATATGTGCACCTATGATGGAATTCCTGCAGAAAAGGTGCGTGAAATAATGTTGATTGCTGGTGCCTCTGCGAAGTCTGCTGAAATGAAGAGTGGTGTTCCCTTCACTTCCTTCATTCCCACTAGCCCTTCTTCACAAGGAAACTCTAATAATCTGGCTTCACCCCAATCCGTCTGTTTTCCTGCAGAGAAGGGTTCCATTTGCAGGCTCCAAGAATTTCCAATAGCACGTAGACAATCACTCCAAAGGTTTCTTGAGAAGCGAAGAAAGAGGTTGGGTAGCAAAGCCCCATATGCCTTCTCACCAACAAAAGTGGCTGACAGCAACTTCTGTGCTGACAATACATCAGATTTTGCTTCTTTGAACTTTGACAGGAGGGATTTCAACCTAGTGTTGCTGCCTCTTGAGGGTAACTAG 627 0.4466 MAGVNSEPEGWKLFPSLMDSAADSNVDGRSDKNLSNDGLVMHFSSARPVPTSGQKAVIPNTTQFTIFYKGNMCTYDGIPAEKVREIMLIAGASAKSAEMKSGVPFTSFIPTSPSSQGNSNNLASPQSVCFPAEKGSICRLQEFPIARRQSLQRFLEKRRKRLGSKAPYAFSPTKVADSNFCADNTSDFASLNFDRRDFNLVLLPLEGN* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2405 208 Pfam tify domain 59 91 IPR010399 -
Apr9g2405 208 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 181 IPR040390 -
Apr9g2405 208 ProSiteProfiles Tify domain profile. 57 92 IPR010399 -
Apr9g2405 208 Pfam Jas motif 144 168 IPR018467 -
Apr9g2405 208 SMART tify_2 57 92 IPR010399 -
Apr9g2405 208 PANTHER DIVERGENT CCT MOTIF PROTEIN 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2405 Apr-Chr9 31518548 31521229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2405 52 177 Tify Gene Family AT5G20900 42.520 2.70e-23 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Apr9g2405 tify 4.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2405 K13464 - gmx:100306282 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2405 9 31518548 31521229 Apr1g2464 1 34254572 34259057 PCT