LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g2386	ATGGGGGATGATTTGGTTCTGCTGGATTACTGGCCAAGCCCGTTTGGGATGAGGGTCCGAATTGCACTTGCTGAAAAGGGTATAAAGTACGAGTACAAAGAAGAGGACTTGACCAACAACAGGAGCTCTCTCCTCCTTCAAATGAACCCAGTTTACCAGCGAGTCCCTGTTCTCATCCGCAATGCCAAACCAGTTTGTGAATACATTGCTGTTCAATACATTGATCAATGGTGGATGTGGCACTTGTTCCTTGCTACAGTTGGTTTCAAGCTTGTGAGACGTTTGGCAGCCTCAATATATAGGACTTTGGATCTTGATTCTTGA	324	0.4537	MGDDLVLLDYWPSPFGMRVRIALAEKGIKYEYKEEDLTNNRSSLLLQMNPVYQRVPVLIRNAKPVCEYIAVQYIDQWWMWHLFLATVGFKLVRRLAASIYRTLDLDS*	108

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g2386	107	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	3	70	IPR004045	-
	Apr9g2386	107	SUPERFAMILY	Thioredoxin-like	4	78	IPR036249	-
	Apr9g2386	107	CDD	GST_N_Tau	5	78	-	-
	Apr9g2386	107	PANTHER	GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN	4	79	-	-
	Apr9g2386	107	Gene3D	Glutaredoxin	1	84	-	-
	Apr9g2386	107	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	4	79	IPR045073	-
	Apr9g2386	107	Pfam	Glutathione S-transferase, N-terminal domain	5	75	IPR004045	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g2386	Apr-Chr9	31416926	31417940	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g2386	1	78	Glutathione S-transferase Gene Family	AT1G78340	62.025	9.18e-32	109

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g2386	K00799		-	aprc:113874706	222.631

Showing 1 to 1 of 1 entries