Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2373 ATGGTGCTTATAAGCCTTGGGATGAAGAATCAAAAGGAAGTAATGCGACTTGGGAAATATGAATTGGGTAGGACTCTTGGTGAAGGCAATTTTGGTAAAGTTAAGTTTGCTAGGAACACTGATTCTGGACAACCGTTTGCTGTTAAGATCATTGAGAAGAACAGGATCATTGATCTCAATATCACGAATCAGATAGAGAGGGAAATTGACACCTTAAAGCTCCTCAGGCATCCCAACGTTGTTAGATTGTATGAGGCATCCAAGGGTAAACTTACCGAAGGTGAAGGTAAAAAAATGTTCCAACAATTGATTGATGGGGTGAGCTATTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTACTTGTGGATGACAAAGGGAACATAAAGATAACCGATTTTGGCCTCAGTGCCTTGCCCCAGCATCTTAGGGCAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAACTATGTTGCACCAGAGATTCTTGCTAATAGGGGCTATGATGGTGCAACATCAGATGCATGGTCATGTGGGGTTATATTGTATGTAATCCTAACAGGATACCTACCTTTTGATGATAGAAATCTTGCAGTTCTCTATCAAAAGATTTGTAAAGGAGATGTTCAAATACCAAAATGGCTATCACCTGATGCACAAAACATGATAAAGAGGATTCTTGATCCCAACCCGGAAACACGGATGACAATGGCTGGGATCAAAGATGATCCATGGTTCAAGCAGGGCTATATTCCAGCAAATCCTGAGGATGAGGAAGAGGATGTACATATTTACAATGGAGCCTTTTCCACCCATGAAGAGCCACTTGAAGCAGAACATAGAGATCCAGGATCACCAACCCTTATCAATGCATTTCAATTGATAGGGATGTCTTCATGTTTAGACCTCTCTGGCTTCTTTGAGAAAGAGGATGTCTCTGAGAGAAAGATAAGATTTACATCAAATCTTTCAGTTAAAGATCTGATAGAGAAGATTGAGGACACAGCGACAGAAATGAAATTTAGAGTCCAGAAGAAAAATGGCAAATTGAAAGTAATACAAGATAACAAGGTGCACAAAACTCTTGGCCACCTCTCCGTGGTAGTAGAGGTGTTTGAAATTAGCCCTTCATTGTATGTAGTAGAATTAAGGAAGTCTTCTGGAGATGTTTCTGAATATAAACAGTTATGCAAGAAGTTATTGAATGATTTGGGTGTTCCCCCAACGCAAGCGCTAGTGAGCTCAGAAATAAATTAG 1272 0.4049 MVLISLGMKNQKEVMRLGKYELGRTLGEGNFGKVKFARNTDSGQPFAVKIIEKNRIIDLNITNQIEREIDTLKLLRHPNVVRLYEASKGKLTEGEGKKMFQQLIDGVSYCHNKGVFHRDLKLENVLVDDKGNIKITDFGLSALPQHLRADGLLHTTCGSPNYVAPEILANRGYDGATSDAWSCGVILYVILTGYLPFDDRNLAVLYQKICKGDVQIPKWLSPDAQNMIKRILDPNPETRMTMAGIKDDPWFKQGYIPANPEDEEEDVHIYNGAFSTHEEPLEAEHRDPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSVKDLIEKIEDTATEMKFRVQKKNGKLKVIQDNKVHKTLGHLSVVVEVFEISPSLYVVELRKSSGDVSEYKQLCKKLLNDLGVPPTQALVSSEIN* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2373 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 115 127 IPR008271 GO:0004672|GO:0006468
Apr9g2373 423 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 85 - -
Apr9g2373 423 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 86 419 - -
Apr9g2373 423 ProSiteProfiles Protein kinase domain profile. 20 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2373 423 Gene3D Transferase(Phosphotransferase) domain 1 10 287 - -
Apr9g2373 423 CDD CIPK_C 295 406 - -
Apr9g2373 423 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Apr9g2373 423 SMART serkin_6 20 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2373 423 Gene3D Kinase associated domain 1, KA1 289 411 - -
Apr9g2373 423 Pfam Protein kinase domain 87 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2373 423 PANTHER SERINE/THREONINE KINASE 86 419 - -
Apr9g2373 423 PANTHER SERINE/THREONINE KINASE 12 85 - -
Apr9g2373 423 SUPERFAMILY Protein kinase-like (PK-like) 17 282 IPR011009 -
Apr9g2373 423 ProSiteProfiles NAF domain profile. 289 313 IPR018451 GO:0007165
Apr9g2373 423 Pfam NAF domain 291 350 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2373 Apr-Chr9 31312622 31317313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2373 86 419 CBL-interacting serine-threonine protein kinases AT3G17510 69.940 5.64e-161 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr9g2373 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2373 K07198 - gmx:100777468 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2373 9 31312622 31317313 Apr9g2373 9 31312622 31317313 ECH
Apr9g2373 9 31312622 31317313 Apr1g2477 1 34376363 34382013 PCT