Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2366 ATGGGTTGCTTTGGCTTTTGCAAAGGAAATGATAGTTATACAACTGCGGACAGAGGACCCTACACGCAGAACACTCCTACTGGGAACAACACCAGTTATCATGGCAGACACACAGCAATAACCACTCCTCAAACTATAAGTTTTCAACCAATTGCTGTCCCGCCTGTTACAGTAGATGAATTGAAGTCCTTGACAGATAATTTTGGCTCAAAATCTTTCATTGGTGAGGGTGCATATGGCAAAGTATATCATGCCACATTGAGAAATGGGCGTGAAGTGGTAATTAAAAAGTTAGATTCCAGTAATCAGCCGGAGCAAGAATTTCTTTCTCAGGTTTCCATCGTATCAAGGCTAAAGCATGAAAATGTTGTTGAGCTTGTTAGTTATTGCGTTGATGGTCCTTTCCGTGCCCTTGCCTATGAGTATGCTCCTAAAGGATCCCTTCATGATATTCTACATGGAAAGAAAGGTTTCAAGGGTGCACAACCTGGTCCGGTTCTATCATGGGCTCAGAGAGTTAAAATTGCTGTTGGAGCAGCCAGAGGACTTGAATATCTCCATGAAAAGGCGGAGATTCATATTATCCATCGTTACATTAAGTCTAGTAACATACTTCTTTTTGATGATGACGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCTGCAGCACGTCTTCATTCTACCCGTGTTCTTGGGACCTTTGGTTATCATGCTCCAGAATATGCTATGACTGGACAACTCACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTATACTGCTGGAACTCTTAACTGGTCGCAAACCTGTCGATCATACACTACCCCGAGGACAGCAAAGCCTTGTGACCTGGGCTACACCAAAGCTCAGCGAAGATAAGGTGAAGCACTGTGTTGATGTTAGACTAAAGGGAGAGTACCCTTCAAAATCAGTTGCAAAGATGGCTGCTGTTGCTGCTCTATGTGTGCAATATGAAGCTGAATTTCGGCCAAATATGAGTATTATAGTCAAAGCTCTACAGCCTCTATTGAATACTCGTTCTGTTCATTCAAAGGAAGCACAGAACATGTAA 1086 0.4217 MGCFGFCKGNDSYTTADRGPYTQNTPTGNNTSYHGRHTAITTPQTISFQPIAVPPVTVDELKSLTDNFGSKSFIGEGAYGKVYHATLRNGREVVIKKLDSSNQPEQEFLSQVSIVSRLKHENVVELVSYCVDGPFRALAYEYAPKGSLHDILHGKKGFKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKAEIHIIHRYIKSSNILLFDDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKHCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLLNTRSVHSKEAQNM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2366 361 CDD STKc_IRAK 74 347 - -
Apr9g2366 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 357 - -
Apr9g2366 361 Gene3D Phosphorylase Kinase; domain 1 30 142 - -
Apr9g2366 361 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2366 361 PIRSF ILK 10 359 - -
Apr9g2366 361 SUPERFAMILY Protein kinase-like (PK-like) 44 344 IPR011009 -
Apr9g2366 361 Pfam Protein tyrosine and serine/threonine kinase 73 344 IPR001245 GO:0004672|GO:0006468
Apr9g2366 361 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Apr9g2366 361 Gene3D Transferase(Phosphotransferase) domain 1 144 361 - -
Apr9g2366 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2366 Apr-Chr9 31271483 31275770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2366 56 350 Receptor kinase-like Gene Family AT4G02010 48.544 8.84e-87 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Apr9g2366 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2366 K13436 - gmx:547596 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2366 9 31271483 31275770 Apr9g2366 9 31271483 31275770 ECH