Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2340 ATGGGTGTTATTCTGTGTCTCCAGCTCCTATGTTTCTTTCTTTTAACTAGTTCCTTCATTAAAGCATCTGATATAAATGTGGGAACCTATGAATCTGATAGAATAACTAACCTTCCTGGCCAACCTTCAAGCCCTTCAGTTTCACACTTTTCAGGTTACATCACTGTCAATGAAGACTATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCGTCCAAGAAGCCTCTCCTTCTGTGGCTCAATGGAGGACCTGGATGCTCCTCCATTGGGTATGGTGCAGCTGTTGAGGTTGGACCTCTTATAGTCAACAAAAATGGGGAAGGGTTGCATTTCAACCCCTACTCTTGGAATCAAGAGGCAAATTTGCTATTTGTGGAGTCCCCAGTTGGAGTTGGATTTTCTTACACTAACACATCTTCTGATCTTACCAGATTAGAGGATAATTTTGTGGCCGAGGATGCTTACAATTTCTTGGTGAATTGGCTTCAAAGATTCCCACAGTTCAAATCCCGGGACTTTTATATTTCAGGAGAAAGCTATGCTGGCCACTATATCCCTCAGCTTGCAGAGTTAGTCTTTGATCGAAACCAAGACAGAACCAAATACCCCTTTATTAATCTTAAAGGTTTTATTGCTGGGAACCCAGAAACTGATGATTACTATGACTATAAAGGCCTGTTGGAATATGCATGGAGCCACGCAGTAATATCTGACCAACAATACGATAAAACAAAGCAAGTATGTGATTTTAAAAAATCGGAATGGTCTAAAGAATGCAATCAGGCCATGAATCTAGTCTTTCAAGATTACTCAGAAATTGATATATACAACATTTATGCCCCTTCATGTCGTCTAAACAACACAGCCTCAAAAGCTGATAATAGTAACAGTAACGGCCCTGAATCATTTACAAAGGTGAGAAATGATTATAGAAAAAAGAGAATGAGAATTTTTGGGGGCTATGACCCTTGTTATTCCACATATGCAGAAGAATATTTCAATAGGGTAGATGTTAAGTCATCTTTTCATGCAGATACTAAAAGAGGCACTAACGTAACATGGAAGGTTTGCAATGATTCCATATTGCGGACTTACAACTTCTCTGTTTTTTCGATCCTACCTATCTACACCAAACTCGTCAAGGGTGGCCTTAAGATATGGATTTACAGTGGAGATGCTGATGGCAGAGTACCAGTGATAGGAACACGATATTGCGTTGAGGCTCTTGGATTACCTCTCCAATCTAGTTGGCAAACTTGGTACCATGATAATCAGGTTGGAGGAAGGATAGTTGAATATGAAGGGTTGACATATGTTACTGTGAGAGGAGCTGGTCACTTGGTGCCACTCAACAAACCCAGTGAGGCTCTCTCACTTATTCATTCTTTCCTAACAGGCGAGCATCTTCCTAGTCGTGGATAA 1434 0.4073 MGVILCLQLLCFFLLTSSFIKASDINVGTYESDRITNLPGQPSSPSVSHFSGYITVNEDYGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAAVEVGPLIVNKNGEGLHFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTRLEDNFVAEDAYNFLVNWLQRFPQFKSRDFYISGESYAGHYIPQLAELVFDRNQDRTKYPFINLKGFIAGNPETDDYYDYKGLLEYAWSHAVISDQQYDKTKQVCDFKKSEWSKECNQAMNLVFQDYSEIDIYNIYAPSCRLNNTASKADNSNSNGPESFTKVRNDYRKKRMRIFGGYDPCYSTYAEEYFNRVDVKSSFHADTKRGTNVTWKVCNDSILRTYNFSVFSILPIYTKLVKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLQSSWQTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLTGEHLPSRG* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2340 477 Gene3D - 376 470 - -
Apr9g2340 477 ProSitePatterns Serine carboxypeptidases, histidine active site. 440 457 IPR033124 GO:0004185
Apr9g2340 477 Gene3D alpha/beta hydrolase 29 289 IPR029058 -
Apr9g2340 477 SUPERFAMILY alpha/beta-Hydrolases 31 473 IPR029058 -
Apr9g2340 477 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 7 475 - -
Apr9g2340 477 Gene3D - 328 365 - -
Apr9g2340 477 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Apr9g2340 477 Pfam Serine carboxypeptidase 39 469 IPR001563 GO:0004185|GO:0006508
Apr9g2340 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Apr9g2340 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Apr9g2340 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Apr9g2340 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Apr9g2340 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 475 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2340 Apr-Chr9 31000139 31002799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2340 351 473 Calmodulin-binding Proteins AT2G22960 29.839 2.24e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2340 K16297 - gmx:100815141 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2340 9 31000139 31002799 Apr9g2340 9 31000139 31002799 ECH