Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2328 ATGGCCATGCAATTGGTATTATTGTGTCTAGTTGTACTCAAGCTCACTCCAACATCTGCAAATACCTTGAATGAAGCCTATGGAGATGATAGTGGGTGCCCATTAGGGACAGGCATATACCAATACACTTGCCCTGAAGCTGAGGCCATAATCTTCTCTTGGGTGGAGCAAGCAGTGTCTGAAGACTCGAGAATGGCAGCTTCACTGCTTAGGCTACATTTTCATGACTGCTTTGTCAATGGTTGTGATGCTTCAGTATTGCTAGATGACACAGAGGAGTTTGTAGGTGAGAAAAGTGCAGGTCCAAACTTGAATTCACTCAGAGGATTTGAAGTAATCGACAAAATAAAATCAGAACTAGAATTAGTCTGTCCACAGACTGTCTCTTGTGCTGACATACTGGCAGCTGCTGCCCGAGATTCAGTTCTTCTGTCCGGAGGTCCAATTTGGGAGGTGAAAATGGGAAGGAAAGATGGTATGACTGCTAGTAAGGAAGGAGCAAATAATAACATCCCAGGCCCAAACTCCACTGTGGATGTTCTCGTCGCTAAGTTCCAGAGTGTAGGCCTTACACTTAAAGATATGGTCGCTCTCTCAGGTGCTCACACAATAGGAAAAGCACGCTGCAAAACATTTAGCTCTCGTTTACAGAGAAGTAGCGACTCAGATAGTCCTAATGCTAATATTGATTTCATCACTTCATTGCAACAGTTATGCTCAGGACAAGACAATAGCAACACAGTTGCACACCTTGACCTGGCTACGCCAGCTACGTTTGATAATCAATACTTCGTTAATCTTCTTTCCGGGGAGGGATTGCTCCCATCAGATCAGACTCTCGTTAATGGGAATGATCAGACACGACAGATTGTTGAAACCTATGTAGACAACCCATTCGCTTTCTTTGAGGACTTCAAGTATTCAATGTTGAAAATGGGAAGCTTGGGATCACTTACACAAAGTAAAGGCCAGATTCGTAGGGACTGCCGAACTATTAACAAATTTTAA 1008 0.4345 MAMQLVLLCLVVLKLTPTSANTLNEAYGDDSGCPLGTGIYQYTCPEAEAIIFSWVEQAVSEDSRMAASLLRLHFHDCFVNGCDASVLLDDTEEFVGEKSAGPNLNSLRGFEVIDKIKSELELVCPQTVSCADILAAAARDSVLLSGGPIWEVKMGRKDGMTASKEGANNNIPGPNSTVDVLVAKFQSVGLTLKDMVALSGAHTIGKARCKTFSSRLQRSSDSDSPNANIDFITSLQQLCSGQDNSNTVAHLDLATPATFDNQYFVNLLSGEGLLPSDQTLVNGNDQTRQIVETYVDNPFAFFEDFKYSMLKMGSLGSLTQSKGQIRRDCRTINKF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2328 335 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 ProSiteProfiles Plant heme peroxidase family profile. 34 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Apr9g2328 335 SUPERFAMILY Heme-dependent peroxidases 35 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 Pfam Peroxidase 55 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 PANTHER PEROXIDASE 40 10 332 - -
Apr9g2328 335 CDD secretory_peroxidase 35 330 IPR033905 GO:0004601|GO:0042744
Apr9g2328 335 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Apr9g2328 335 Gene3D Peroxidase, domain 2 172 313 - -
Apr9g2328 335 PANTHER PEROXIDASE 72-RELATED 10 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g2328 335 Gene3D - 40 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2328 Apr-Chr9 30912028 30913933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2328 38 333 Peroxidase AT4G16270 64.430 1.04e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2328 K00430 - gmx:100787637 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2328 9 30912028 30913933 Apr9g2328 9 30912028 30913933 ECH