Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2325 ATGGCATCATCGTCGTCATCATCATCATCATCTCTGATCTCAAACCCGGTACCGAACACGGAGCGGTCACGTGACTCAAAGAGGCGAAGAAAGAAGAAAGCGCAGCAGAGACACCAACACCAAGAGGATCAGAGCCACCCAAAGTGGAAATCCCAAGCGCAGCAACAAATCTACTCCTCCAAGCTGCGCCAAGCCTTAGCCAGACTCAACCTCGGCTCATCCGGCTCCGTTCCGCGCCGAGGCAAAGCCGTCCGCGAAGCTGCCGACAGAGTCCTCGCCGTAACGGCAAAGGGGAGGACTCGGTGGAGCCAAGCCATCCTGAGGAACCGGCTCAAGCTCAAGTTCACCAAACACAAGAGACAGCGAGTGGCATCACCGCCAACACGGTCAAAGAAACCCCGGGTCAGCGTTTACCGGCTGAAGGGGAAGAGTTTACCGGGTGTGCAGAGGAAAGTAAGGTTCCTTGGACGGTTGGTTCCCGGTTGCCGAAAACAACCTTTACCGGTTATTCTAGAAGAAGCCATTGATTATATATCTGCGCTTGAGATGCAAGTTCGAGCCATGAACGCTGTGTTTAACCAATTCTCTGCCGCTTCCTCCACTTCTTAG 609 0.5402 MASSSSSSSSSLISNPVPNTERSRDSKRRRKKKAQQRHQHQEDQSHPKWKSQAQQQIYSSKLRQALARLNLGSSGSVPRRGKAVREAADRVLAVTAKGRTRWSQAILRNRLKLKFTKHKRQRVASPPTRSKKPRVSVYRLKGKSLPGVQRKVRFLGRLVPGCRKQPLPVILEEAIDYISALEMQVRAMNAVFNQFSAASSTS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2325 202 MobiDBLite consensus disorder prediction 1 56 - -
Apr9g2325 202 CDD bHLH_AtIBH1_like 139 190 IPR044549 GO:0006355
Apr9g2325 202 MobiDBLite consensus disorder prediction 1 20 - -
Apr9g2325 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 13 201 IPR044660 GO:0006355
Apr9g2325 202 Coils Coil 24 44 - -
Apr9g2325 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 196 IPR036638 GO:0046983
Apr9g2325 202 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 13 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2325 Apr-Chr9 30873728 30875539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2325 45 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 57.055 6.53e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2325 - - gmx:100803765 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2325 9 30873728 30875539 Apr9g2325 9 30873728 30875539 ECH
Apr9g2325 9 30873728 30875539 Apr1g2050 1 30025677 30026988 PCT