Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2315 ATGGGAACTCCACCAACAGATGAGCTTCTGAAGAAGATCCAGCAGCTAGAGGAGGGACACGCGCACCTGAAGCAAGAAATGTCAAAGCTGAAGCTCTCCGATGTGAGGCACGGCCATCGCCAGAGATCTCACTCCGTTTCTCCGCAGCGTTCAAGATTCGGTGCTCTCTCCAAGAACCGAACTGATGCACCAACCGCGTTGAAGAAAGGCTCGTGTTCCTTCAAACACTCCTCGCCGTTGCAGAGGGAGAGTCGCGGCGGCGATCCTCCAATTCAGGGCGCCGAAGAAGAAGAAGTACAAAAAGCTGGTCCAAACGGTGGTCCTTCCGCTGTTAATTTCACAGAACGCCAATATCTCAATATTTTGCAGTCAATGGGACAGTCTGTTCATATATTGGATCTTAACTCTCGCATAATATACTGGAACCGTAGTGCTGAGAAGCTTTATGGTTATACCGCAGAGGAAGCTCTAGGGAAGGATGGGATTGAGTTGCTTGTGGACCCTAGAGATTTTGTCTTAGCCAATGATACAGTGAATCGTGTCATGATGGGAGAGAGCTGGACAGGGCAATTTCCGGTCAAGAATAAGATGGGAGAGAAGTTTTTGTCTGTGGCCACTAATACTCCTTTCCATGATGATGATGGAAGCTTAGTTGGAGTTATTTGTGTCTCCAGTGATTTGCAGCCCTTTCTTGAAATGAGAGTTCCTATGTCAGGTGAGAGAAACTCCGAATCAGATTCAGATGCCCGACCTAGAAGTAGCATTACCAATAAACTTGGCCTTGATACTCAACAGCCGCTTCAAGTTGCTCTAGCGTCCAAAATTTCAAATTTGGCATCAAAGGTGAGTAACAAAGTTAAGTCAAGAATCTGGACAGGAGAAAATAATGGGGATCGCGAAGGTGGGAACGGTGAAAGTCGTCATTCTGAGCATAGTTTCTCAGAGAGAGAGGATGCTAATTCCAGTGGAGCTAGCACCCCTAGAGGTGATGTGCCACAATCCCATTTTGGTGTATTTTCACAAGTTGAAGAGAAATCCCAGGGAAAAGGTCGAAGAGACTCTGGTGATGAGAGCGAAGGAAAACCTATTCACAAAAGTGTACCTTCTAAGGCTGAGGCCTGGATACAAAGGAAAACATTATCATGGCCATGGAGAACAAATGATCGTGAAGGATCGGGGGCAAGGAATGTTTGTGTTGCTGGTTCCTGGAGACAGAATGATCAAGAAAATGAGTCAGTAAATCCTAAGATTCTTTCTTGTGGCTTGAAGCAAGAAGGCCAGGCAGGTGAAAGTAATCGCCCTAATAACAATGAGGCTTCAGGATCCTGGTCCTCCTCTGTTAATGTTAACAGCACAAGTAGTGCCAGCAGCTGTGGGAGTGCTGGCAGTTGTGCTGTTAATAATAGAGTGGATGTGGACACTGATTGCTTGGATTATGAAATTTTGTGGGAGGACCTGACGATTGGAGAACAAATTGGAGAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCCGTCAAGGTTTTCTCCAAGCAAGAATATTCAGATGATGTGATATTGTCCTTCAGACAAGAGGTGTCTGTGATGAAAAGACTTCGACACCCAAATATTCTTCTCTTCATGGGGGCCGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCTCGTGGAAGCTTGTGTCGCTTGTTACACAGAAATACGTCTAAACTTGACTGGAGACGACGAGTTCATATGGCTGTGGATATTGCACTAGGCGTAAATTATCTTCATCATTGTAACCCACCTATCATCCACAGAGATTTGAAGTCCTCAAATCTTCTAGTTGATAAAAACTGGACTGTCAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAGCATGAAACGTTTCTCACAACTAAAACAGGGAGAGGCACGCTTCAATGGATGGCACCAGAAGTTCTTCGTAATGACCCCTCCGATGAGAAGTCTGACGTTTACAGCTTTGGGGTGATATTATGGGAACTTGCAACTGAAAAGATACCTTGGGATAATCTCAACTCAATGCAGGTGATTGGAGCTGTGGGGTTCATGAATCAGAGGCTAGAAATTCCAAAAGATGTTGATCCACGGTGGGCTTCTATTATTGAGAGCTGCTGGTATAGTGATCCAGCTTGTCGGCCAACATTCCCGGAACTGCTTGAAAGGCTTAGAGAGCTGCAAAAACGGTATGCCATTCAGTTTCAGGCAGCCCGATCCGCTGGCAAGGAAAGCACCCAAAAGGAGTCCTAG 2295 0.4575 MGTPPTDELLKKIQQLEEGHAHLKQEMSKLKLSDVRHGHRQRSHSVSPQRSRFGALSKNRTDAPTALKKGSCSFKHSSPLQRESRGGDPPIQGAEEEEVQKAGPNGGPSAVNFTERQYLNILQSMGQSVHILDLNSRIIYWNRSAEKLYGYTAEEALGKDGIELLVDPRDFVLANDTVNRVMMGESWTGQFPVKNKMGEKFLSVATNTPFHDDDGSLVGVICVSSDLQPFLEMRVPMSGERNSESDSDARPRSSITNKLGLDTQQPLQVALASKISNLASKVSNKVKSRIWTGENNGDREGGNGESRHSEHSFSEREDANSSGASTPRGDVPQSHFGVFSQVEEKSQGKGRRDSGDESEGKPIHKSVPSKAEAWIQRKTLSWPWRTNDREGSGARNVCVAGSWRQNDQENESVNPKILSCGLKQEGQAGESNRPNNNEASGSWSSSVNVNSTSSASSCGSAGSCAVNNRVDVDTDCLDYEILWEDLTIGEQIGEGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMAVDIALGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETFLTTKTGRGTLQWMAPEVLRNDPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWASIIESCWYSDPACRPTFPELLERLRELQKRYAIQFQAARSAGKESTQKES* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2315 764 ProSiteProfiles Protein kinase domain profile. 486 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2315 764 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 27 762 - -
Apr9g2315 764 CDD PAS 125 227 IPR000014 -
Apr9g2315 764 MobiDBLite consensus disorder prediction 237 261 - -
Apr9g2315 764 SMART serkin_6 486 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2315 764 MobiDBLite consensus disorder prediction 23 110 - -
Apr9g2315 764 MobiDBLite consensus disorder prediction 425 448 - -
Apr9g2315 764 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 762 - -
Apr9g2315 764 TIGRFAM sensory_box: PAS domain S-box protein 115 227 IPR000014 -
Apr9g2315 764 Pfam Protein tyrosine and serine/threonine kinase 486 738 IPR001245 GO:0004672|GO:0006468
Apr9g2315 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Apr9g2315 764 Pfam PAS fold 117 226 IPR013767 GO:0006355
Apr9g2315 764 Gene3D Phosphorylase Kinase; domain 1 479 563 - -
Apr9g2315 764 MobiDBLite consensus disorder prediction 345 366 - -
Apr9g2315 764 ProSiteProfiles PAS repeat profile. 114 185 IPR000014 -
Apr9g2315 764 MobiDBLite consensus disorder prediction 290 374 - -
Apr9g2315 764 Gene3D Transferase(Phosphotransferase) domain 1 565 751 - -
Apr9g2315 764 SMART pas_2 116 183 IPR000014 -
Apr9g2315 764 CDD STKc_MAP3K-like 492 738 - -
Apr9g2315 764 Gene3D PAS domain 126 229 - -
Apr9g2315 764 PRINTS Tyrosine kinase catalytic domain signature 560 573 IPR001245 GO:0004672|GO:0006468
Apr9g2315 764 PRINTS Tyrosine kinase catalytic domain signature 599 617 IPR001245 GO:0004672|GO:0006468
Apr9g2315 764 PRINTS Tyrosine kinase catalytic domain signature 646 656 IPR001245 GO:0004672|GO:0006468
Apr9g2315 764 PRINTS Tyrosine kinase catalytic domain signature 665 687 IPR001245 GO:0004672|GO:0006468
Apr9g2315 764 PRINTS Tyrosine kinase catalytic domain signature 709 731 IPR001245 GO:0004672|GO:0006468
Apr9g2315 764 MobiDBLite consensus disorder prediction 300 317 - -
Apr9g2315 764 SUPERFAMILY PYP-like sensor domain (PAS domain) 114 226 IPR035965 -
Apr9g2315 764 Coils Coil 6 33 - -
Apr9g2315 764 SUPERFAMILY Protein kinase-like (PK-like) 475 738 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2315 Apr-Chr9 30803429 30810012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2315 1 755 MAP Kinase Kinase Kinase AT3G06620 60.103 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr9g2315 PK_Tyr_Ser-Thr 6.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2315 - - gmx:100800867 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2315 9 30803429 30810012 Apr9g2315 9 30803429 30810012 ECH
Apr9g2315 9 30803429 30810012 Apr1g2059 1 30082792 30092440 PCT