Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2310 ATGGTTGACACTCGCAGTATAGAGAGCAGGGTTCTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGAAACTGTGAAATTGGGACTAAAAAAGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTCGAAAGCAGGGAGCTTGTCGGGGTGGTTCGAGGATGCATTAAGAGTATGGGAACTCCTTCTGAATCAATGCTGAAGATAGGTTGCATACTAGGCCTTAGGGTCTCTCCTACACACAGGAGAAAGGGGGTTGGACTAAAACTTGTCGCCTCAGTTGAAGAATGGATGCTGAGAAATGGAGCTGAATACGCATTCCTAGCCACTGAAAAGAACAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAACTATGTGAACCTAAGCTCACTTGTCATATTTGTCCATCCAATTAGTTTCCCGGCAAAGCATATTTCCAAGGATATAAAAATTGAGAAGGTAAACATAGACCAAGCAATTTCCTTATACAAAAGAACCTTGAGGGCCAAAGAGTTGTATCTACTAGACATGGACGTCATTTTGAAGGAGAAACTCAGCTTGGGCACTTGGGTGAGTTATTACAAAGATGAAGGCTGGCTCAACTTGCAGAGAAAGAAAGAAAGTGAAGACATAATCAACAATGAAATCACAAGCTCGTGGATCATCTTTAGCATATGGAATACTTGTGAAGCTTATAAGCTTCAGCTTAAAAAGTCTCAACCACTTAGGTTTCTTCACACAACTTTAAATCATGCAAGGGACAAAATTTTCCCATGCCTGAGAATGTCGGTGAGTGGCTCACTTTGTAGACCTTTTGGGTTTCTATTCCTCTATGGACTTCACGGGGAGGGAGAGAACCTCGGGGAGCTAATGGAATCTATATGGAGGTTCACATCAAGATTGGGAGAAAGTTTGAAGGATTGCAGAGTGGTCATAACTGAGTTAGGGTTTGGTGATCCACTAGTAAACCATGTTCCTCAAACCGCTTCTATGTCGTGTATCGATGATGTTTGGTACACAAAAAGACTTTCAAACCACTGTGACGAAAAGGATGAATTGCTGATGAAGAGACAAATAGGGAATGCATTTGTTGACCCTAGAGATTTTTAG 1191 0.4198 MVDTRSIESRVLIREFDEDRDVKVVGKLERNCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESRELVGVVRGCIKSMGTPSESMLKIGCILGLRVSPTHRRKGVGLKLVASVEEWMLRNGAEYAFLATEKNNDASRNLFTNKCNYVNLSSLVIFVHPISFPAKHISKDIKIEKVNIDQAISLYKRTLRAKELYLLDMDVILKEKLSLGTWVSYYKDEGWLNLQRKKESEDIINNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLHTTLNHARDKIFPCLRMSVSGSLCRPFGFLFLYGLHGEGENLGELMESIWRFTSRLGESLKDCRVVITELGFGDPLVNHVPQTASMSCIDDVWYTKRLSNHCDEKDELLMKRQIGNAFVDPRDF* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2310 396 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 396 - -
Apr9g2310 396 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 213 IPR000182 GO:0016407
Apr9g2310 396 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Apr9g2310 396 CDD NAT_SF 62 133 - -
Apr9g2310 396 Pfam Acetyltransferase (GNAT) family 65 152 IPR000182 GO:0016407
Apr9g2310 396 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 3 396 - -
Apr9g2310 396 Gene3D - 27 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2310 Apr-Chr9 30773927 30775509 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Apr9g2310 Acetyltransf_1 9.8e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2310 - - gmx:100814448 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2310 9 30773927 30775509 Apr9g2310 9 30773927 30775509 ECH
Apr9g2310 9 30773927 30775509 Apr1g2065 1 30144044 30145599 PCT