Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2308 ATGGCGTTTTGGTGGCCATTGCTCGTTTTAGCATTCGCTTACGGTCTCTGTAGGTTCCTTCTCATGCTAATTCCTCCCAAGGTTCCTTCCATCGACGTTGACACTTCCGACGGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGGAAAATTGTGGTAACGGTGAAAATTTTATAATGACAGTGTTGGACGATGGAAACCAAGCGCAGGAGAACAGCTTCATTTATGTGCCTCCGAGAGGAACATCACAACAATCGAGCAGCAGGATAGTTCAGTGCTATGAGCCTGCAACTATGAAATATTTAGGATATGTTCCAGCATTGACACATGATGAGGTCAAGGATCGAGTGGCAAAAGTAAGGAAGGCACAAAAAATGTGGGCAAAGTCCAGCTTCAAGCAAAGACGCTTGTTTTTACGTATACTTTTAAAGTATATAATTAAACATCAAGCGCTTGTATGCGAAATATCTTCACGTGATACTGGAAAGACAGTGGTAGATGCCTCTTTAGGAGAAATAATGACAACATGCGAAAAGATCAATTGGCTACTATCAGAGGGCGAGCAGTGGTTAAAGCCTGAATACCGGTCTTCTGGAAGATCAATGCTTCATAAGAGAGCCAGAGTAGAATTTCACCCCCTTGGTGTTATTGGAGCCATTGTTTCATGGAATTATCCTTTCCACAATATTTTTAATCCTATGTTGGCAGCAGTTTTTTCTGGAAATGGTATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCAGCGCTTTCTGCCATAGGAGCTCCAGAGGACCTTGTTGAAGTGATAACAGGGTTTGCTGAAACGGGAGAAGCATTGGTATCTTCTGTTGATAAAGTCATATTCGTTGGATCTCCAGGTGTCGGTAAGATGATAATGAAAAATGCTGCTGACACACTTATACCAGTGACACTAGAGCTTGGTGGAAAAGATGTATTTATTGTTTGTGAAGACGTAGATCTGGACCATGTTGCTCAAGTTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGACAGAACTGTGCTGGAGCGGAACGATTTTATGTCCACAGGGAAATTTATTCTGCTTTTGTCAGTAAAGTTACCAAAATAATAAAGTCTGTAACAGCTGGCCCACCGCTTGTTGGAAAGTATGATATGGGAGCTCTATGCATGCATGAGCATTCTGAAAAGCTTGAAGGCCTTGTAAATGATGCCTTAGAAAAAGGAGCTGAAATTGTTGCACGAGGGAGTTTTGGACATATAGGTGAAGATGCAGTTGATCAGTATTTCCCCCCTACTGTGATTGTGAATGTGAATCACTCAATGAGATTGATGCAAGAAGAGACATTTGGACCAATCATGCCAATAATGAAATTCAGCTCTGATGAGGAAGTTGTCAGGCTTGCAAATGACTCAAAATATGGGCTCGGCTGTGCTGTTTTCTCAGGCAGTCAGAGCCGTGCCAGAGAGATAGCTTCACAGATACATACTGGGGTAGCTGCAGTTAATGATTTTGCAGCAACGTACATGTGTCAGTCCCTGCCATTTGGTGGTGTGAAACATAGTGGATTTGGACGATTTGGCGGTGCAGAAGGATTGCGAGCTTGCTGTCTAGTTAAAGCAGTTGTTGAAGATCGATGGTGGCCATTTCTGAAAACCAAGATACCTAAGCCTATTCAGTATCCTGTTGCAGAGAATGGATTTGAGTTTCAGGAGTCACTTGTTGAAGGGCTTTATGGTCTCAGCATATGGGACCGTTTGCGAGCATTAGTAAACGTTTTAAAAATGCTTACTGAACAGAACCCTGCCGGCAGCAGCAACAAGCGAAAAAACGAGTAA 1869 0.4286 MAFWWPLLVLAFAYGLCRFLLMLIPPKVPSIDVDTSDGTLSLSLSLSLMENCGNGENFIMTVLDDGNQAQENSFIYVPPRGTSQQSSSRIVQCYEPATMKYLGYVPALTHDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKYIIKHQALVCEISSRDTGKTVVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALSAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMKNAADTLIPVTLELGGKDVFIVCEDVDLDHVAQVAVRAVLQSSGQNCAGAERFYVHREIYSAFVSKVTKIIKSVTAGPPLVGKYDMGALCMHEHSEKLEGLVNDALEKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEETFGPIMPIMKFSSDEEVVRLANDSKYGLGCAVFSGSQSRAREIASQIHTGVAAVNDFAATYMCQSLPFGGVKHSGFGRFGGAEGLRACCLVKAVVEDRWWPFLKTKIPKPIQYPVAENGFEFQESLVEGLYGLSIWDRLRALVNVLKMLTEQNPAGSSNKRKNE* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2308 622 CDD ALDH_F15-22 94 556 - -
Apr9g2308 622 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 350 361 IPR016160 GO:0016491
Apr9g2308 622 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 586 - -
Apr9g2308 622 SUPERFAMILY ALDH-like 81 554 IPR016161 GO:0016491
Apr9g2308 622 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 330 525 IPR016163 GO:0016620
Apr9g2308 622 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 59 586 - -
Apr9g2308 622 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 91 550 IPR016162 GO:0016491
Apr9g2308 622 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 322 329 IPR029510 GO:0016491
Apr9g2308 622 Pfam Aldehyde dehydrogenase family 87 552 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2308 Apr-Chr9 30748596 30760131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2308 1 621 Aldehyde Dehydrogenase Gene Family AT3G66658 75.040 0.0 1001
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2308 - - aprc:113848242 1231.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2308 9 30748596 30760131 Apr9g2308 9 30748596 30760131 ECH