Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2297 ATGGCAAAGTCGAAGAACCACACAGCTCACAACCAGTCCTACAAAGCCCACAAAAATGGCATAAAAAAGCCAAAGAGGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTACGCAAGGAAGCATAACAAGAAGAGTGGTGAGGCAGCCACGGAAGAAGAGTAA 186 0.4892 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGEAATEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2297 61 Gene3D - 1 61 - -
Apr9g2297 61 MobiDBLite consensus disorder prediction 1 32 - -
Apr9g2297 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Apr9g2297 61 Coils Coil 55 61 - -
Apr9g2297 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Apr9g2297 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Apr9g2297 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2297 Apr-Chr9 30671262 30671939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2297 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 1.49e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2297 K02905 - tcc:18603616 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2297 9 30671262 30671939 Apr9g2297 9 30671262 30671939 ECH
Apr9g2297 9 30671262 30671939 Apr1g2086 1 30401379 30402089 PCT