Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2287 ATGAGAGTTGAAAAAGAAGCAACAAAAGGTGAAGGTGGATATGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACCTCAAAATCTCGTAAGAAATTATTTGCAACCAAGTCGGATTCACCAGAGTCTTTGAAACAGAGAAGAAAAATTGATGGCAACTTGGCAATGACACATCCCTTTCTGGTGGACGAAGATGATATTGGAGTAGGGATAAGCATTAGAGATAGTAACGATCATAGTTATGCTTCATCTGTTATAGATGATGAAGTATGTGGAACAAGGGCCCCTAGTGTAGTTGCCAAGCTAATGGGATTAGATTCCTTGCCCTCTTCCAGTTTGCCTGATCCATACTTTGACAGCCAATCTCTTCAAGATGTGCAGTATTGGAAGACAAATCACAATCATCTCCATGGTCATCAGATTCTATATTCTGGAAAGTTGATTGAACAGTCTGAGGGATCTTCTAGGAACTTCATGGAGACAAAACCGCAAAAGACCCTAAGCAGGCCAATTGAAAAGTTTCAGACTGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAGCCCTGGCTTTGTTCCAGCAAATAATGCTACTTACATAATGGAGGCTGCTGCAAGAATTATTGAACCCCGCCCCCTAGCTACTGCAAAGGCTAAAACACCTTTGGTAGCATCATCAATAGTGTCATTGAGGATTAGAGATCTCAAAGATAAAGTAGAGACTTCACAAAAAGGACCACTAATTGGGTCATCTTCACTAATGTTTAAAGTTAGAGATCTAAAAGAAAAAAGAGAAATTCCTCATAGAACCAGCAGATTTTTTGAACCTTCACAAGGGTCAGCTGAGTCTAATTATTCTAAGCATCTAAAGGGACAATCTTTCAACAAAAGTTGGAATGGGTCAGCAGATGCACCTCTTAGATATCTTACTGAAGAAGGAGAACATTCTTTTTTGAAGAATAAAGGGAAGTCTGTTTCACTTGCAATCCAAGCAAAAGTTAATGTTCAAAGAAGGGAAAAGGAAGGCTTGAGTTTAGGTGGTGCAAAAAGTTTGGTGGATGAAAAAGAACATTGTGACATAAAAACCCACCAGCTTTGGAAGGCAAATGTTCGAAAAAGTTTGCAAAAGAAACCTTATAATCAAGATGCTTCTGGTGTTCTCAGGCAAAATAATCTGAAACAGAATTGCTCAACCGATAAAGATAAACTACCATTTAAGCCATTAGTTTCCAGTTTACATAGTAGAAAACTTTTGACTGGGGGGGATTCCTCTCATGGACGTCATAGAAGCTCTAGTAGTAAATCCATTGCAAAATCTAAAGCTGGATCTAAAAAATCATCAATGCATGTGACAGATAGTGAAAAGGAAGTTTTATATACTCGTACAAATAATTTCCCTAGGAAGAAGAGGTCCACAGACAGGGACTGGAATGATAGGGTTGTTGATAATTTGTTCATTGACAAAACTCAGAAGCTTGTTCAATCTAAAGTTAGTAATGAACACCATAGTTGGGCTGAAGAAGTAAAAAAGAAAGACACGGATGTAGTTTCCTTCACATTTAGCATGCCGTTGACAAGGAGCAGTTCTGGTTTTGAGACATCTGAACAAGCTGGCTTGAAGACTAATGGCCTTTTAGATCAGCATATTGAAAGAGGGTTGCTTGACACTGACAGTACAAGGTTTCCAGTAGGATACAATGGGATTGGTGGTGATGCCTTAGGTATTCTTTTGGAACAAAAGTTAAGGGAATTAACATGTGGAGTTGAGAACTCATGTGATGACTCTTTCAAAGCATGGTTACCTTCTAGTACTCCACCAACATCAAAAGATCTGGTGCCCACCCTTAATTCAGTTAACCTCATTCCACAGTTGCAACAGAAGAAAGAGCAAGATGTGACATTGACAGAAAAGTTATTCGGTAGCCCTGAATCTGACATTTCCTACACTTGTCTTCCAGAATTATCATACAAACATAGACTTGGGGTTGATGAGATGGGGGAGTGTAAGAGCAATCTTGTGGATGCAGAATTATTCAATTCCCGACAGCCTAGTTCAATGTCTGTTCTTGACCCTTCTTTTTCTACGGAAAGCTGTGAATCTTCATTCCACACAAATGATTCCAGTGCAGAAGATCAAAACAGAAGGAAACAAGTTGTGGGCTTTAATTCATCAAGGAGGCACTATCCTACAGGAGCTGATATAGAGTTGTTTGATTCAGCTTGTTCAGCATCAGCAAAGAAACACACAAATGCATTTTCTCAAATGAAGTTTGGTTGCTCAAGTAGTAGATGGGAGTTGGATTATGTGAATGATGTATTGTGTAATGTGGAGTTGATGTACATGGACTTTGCTCTTGGTAGAGCTCGTGACATTGTGAACCCTCACTTGTTCAACCAGTTGGAGAGTCGAAAGGGAAGGTCTGAGAGTGATGGTGGGAAGAGTAGGATGAGAAGGAAAGTCATATTTGATTGTGTGAGTGAATGTTTGGACTTAAGATGCAGGCGTTATGTTGGTGGGGGATACAAAATGTGGGCCAAAGGAGTTGCAATGGTAAGAAGAAATGAATGGTTGGCAAAGGAAGTGTACAAGGAAATTTCAAGTTGGAGGGATATGGGAGATTCCATGGTTGATGAGCTTGTAGATAGAGACATGTGCAACCCATATGGACGATGGCTAGATTTTGAGGTTGATACTTTTGAACTTGGTGCAAAGGTTGAAGACCAAATATTTAATTCTTTGGTTGATGACTTCGTGGCCGAAATCCTGTAA 2802 0.3958 MRVEKEATKGEGGYVGGFFQLFDWTSKSRKKLFATKSDSPESLKQRRKIDGNLAMTHPFLVDEDDIGVGISIRDSNDHSYASSVIDDEVCGTRAPSVVAKLMGLDSLPSSSLPDPYFDSQSLQDVQYWKTNHNHLHGHQILYSGKLIEQSEGSSRNFMETKPQKTLSRPIEKFQTEVMPPKSAKSIPVTHHKLLSPIKSPGFVPANNATYIMEAAARIIEPRPLATAKAKTPLVASSIVSLRIRDLKDKVETSQKGPLIGSSSLMFKVRDLKEKREIPHRTSRFFEPSQGSAESNYSKHLKGQSFNKSWNGSADAPLRYLTEEGEHSFLKNKGKSVSLAIQAKVNVQRREKEGLSLGGAKSLVDEKEHCDIKTHQLWKANVRKSLQKKPYNQDASGVLRQNNLKQNCSTDKDKLPFKPLVSSLHSRKLLTGGDSSHGRHRSSSSKSIAKSKAGSKKSSMHVTDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFIDKTQKLVQSKVSNEHHSWAEEVKKKDTDVVSFTFSMPLTRSSSGFETSEQAGLKTNGLLDQHIERGLLDTDSTRFPVGYNGIGGDALGILLEQKLRELTCGVENSCDDSFKAWLPSSTPPTSKDLVPTLNSVNLIPQLQQKKEQDVTLTEKLFGSPESDISYTCLPELSYKHRLGVDEMGECKSNLVDAELFNSRQPSSMSVLDPSFSTESCESSFHTNDSSAEDQNRRKQVVGFNSSRRHYPTGADIELFDSACSASAKKHTNAFSQMKFGCSSSRWELDYVNDVLCNVELMYMDFALGRARDIVNPHLFNQLESRKGRSESDGGKSRMRRKVIFDCVSECLDLRCRRYVGGGYKMWAKGVAMVRRNEWLAKEVYKEISSWRDMGDSMVDELVDRDMCNPYGRWLDFEVDTFELGAKVEDQIFNSLVDDFVAEIL* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2287 933 MobiDBLite consensus disorder prediction 391 409 - -
Apr9g2287 933 Pfam Domain of unknown function (DUF4378) 776 927 IPR025486 -
Apr9g2287 933 PANTHER EXPRESSED PROTEIN 1 255 - -
Apr9g2287 933 PANTHER EXPRESSED PROTEIN 253 933 - -
Apr9g2287 933 MobiDBLite consensus disorder prediction 391 466 - -
Apr9g2287 933 Pfam DUF761-associated sequence motif 82 111 IPR032795 -
Apr9g2287 933 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 255 - -
Apr9g2287 933 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 253 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2287 Apr-Chr9 30592845 30596521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2287 775 933 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 38.750 4.45e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2287 - - gmx:102660038 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2287 9 30592845 30596521 Apr9g2287 9 30592845 30596521 ECH
Apr9g2287 9 30592845 30596521 Apr1g2094 1 30484006 30487899 PCT