Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2286 ATGAAGCTATTTGGTTTCCCCTTGAGTGAGGACTTGGCTGGTGGAATTAAGAGATACCAGTGCCGATACTGTCTTCGCCAATTTGCCAATTCTCAAGCTCTAGGAGGTCACCAAAATGCGCACAAGAAAGAACGTGCTAGGCTAGCACAGTTCAGATACCTTCATCGTCTTCGTCAACATGACCATAGGCTCAGAACAGCATCAAATGGAGCACAAGGATCAGGATCTTCTCTTCATCCAAATGGGTCACTGAACTTTAGTGTTGGTAGTGCAACTAGTGCTGGTGCAGCTTGGTTTCATAGTACTGCAGGGTCACCACATCACTTCCCTTTTTCCAGCTCATCTAGGACAGTGCCCTTACAAGTTCCACCGGGTGATGATGATGTGGATCTCAACCTCACACTCGCTTGCTCCTCAGAGAACTTCAAGACCTGA 435 0.4736 MKLFGFPLSEDLAGGIKRYQCRYCLRQFANSQALGGHQNAHKKERARLAQFRYLHRLRQHDHRLRTASNGAQGSGSSLHPNGSLNFSVGSATSAGAAWFHSTAGSPHHFPFSSSSRTVPLQVPPGDDDVDLNLTLACSSENFKT* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2286 144 Gene3D Classic Zinc Finger 7 75 - -
Apr9g2286 144 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Apr9g2286 144 PANTHER ZINC FINGER PROTEIN 5 1 138 IPR044299 GO:0010090
Apr9g2286 144 ProSitePatterns Zinc finger C2H2 type domain signature. 21 41 IPR013087 -
Apr9g2286 144 PANTHER ZINC FINGER PROTEIN 8-LIKE 1 138 - -
Apr9g2286 144 SUPERFAMILY beta-beta-alpha zinc fingers 17 46 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2286 Apr-Chr9 30586580 30587014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2286 17 54 C2H2 Transcription Factor Family AT1G67030 65.789 1.80e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2286 - - gmx:102670392 127.487