Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2283 ATGGTTGATCCAAGTGGAAAAGGATCAGAAGGAGAGGATGCAAACCCTAACGCTGCATCATCGGGGAACAGTCCGAGCAGCAGTGAACAGAAGAAAACCTGCGCCGATTGCGGCACTACCAAGACCCCTCTCTGGCGAGGTGGCCCCGCAGGACCAAAGTCTCTCTGCAACGCGTGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCGATATTGGGAATAAGCAAGGGGAGCAACGAGGATGGGAGAAAGGGGAAGAGGAGCAGTAGCAGTGGCGGTGGAAGCAGCAAGGTTGGGGAGAATTTGAACTTGAAACAGAGGTTGTTGTCTTTGGGGAGAGAAGTGTTGATGCAGAGATCGCATTGGAAGAAGCTTGGAGAAGAAGAGCAAGCTGCGGTCTTGTTGATGTCACTCTCTTATGGATCCGTTTATGCTTGA 435 0.5172 MVDPSGKGSEGEDANPNAASSGNSPSSSEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGISKGSNEDGRKGKRSSSSGGGSSKVGENLNLKQRLLSLGREVLMQRSHWKKLGEEEQAAVLLMSLSYGSVYA* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2283 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 28 68 - -
Apr9g2283 144 ProSitePatterns GATA-type zinc finger domain. 34 59 IPR000679 GO:0006355|GO:0043565
Apr9g2283 144 MobiDBLite consensus disorder prediction 1 57 - -
Apr9g2283 144 CDD ZnF_GATA 33 68 IPR000679 GO:0006355|GO:0043565
Apr9g2283 144 Pfam GATA zinc finger 34 68 IPR000679 GO:0006355|GO:0043565
Apr9g2283 144 MobiDBLite consensus disorder prediction 87 101 - -
Apr9g2283 144 MobiDBLite consensus disorder prediction 14 37 - -
Apr9g2283 144 MobiDBLite consensus disorder prediction 69 101 - -
Apr9g2283 144 ProSiteProfiles GATA-type zinc finger domain profile. 28 64 IPR000679 GO:0006355|GO:0043565
Apr9g2283 144 PANTHER OS01G0976800 PROTEIN 1 144 - -
Apr9g2283 144 SMART GATA_3 28 82 IPR000679 GO:0006355|GO:0043565
Apr9g2283 144 Gene3D - 28 92 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2283 Apr-Chr9 30562275 30563344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2283 1 144 C2C2-Gata Transcription Factor Family AT5G49300 56.552 8.18e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Apr9g2283 GATA 6.5e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2283 - - aprc:113847917 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2283 9 30562275 30563344 Apr9g2283 9 30562275 30563344 ECH