Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2281 ATGAAGATGCTCTGGCCCCTATCAACCCACTCTTGCTGCATCAGTATCGCCATCTTAACAATCTTCTTCGCAACGACGTCGTTTAGCGATGCTCAAACCTGCAACGGCATACTCCTCTCTTACGCCTATGCCGGCGGAACGCGGCTGCCGCCGAACGTCTCCGACCCGGCGAAGCAACCGTATCGGTTTGAGTCGACGCTGACGGTGCTCAACAACGGTCTCGACGAGCTCAAGTCTTGGAAGGTCTTCGTTGGGTTTGACCATGACGAGTGGTTGGTCTCCGCCTCCAATGCTGTGCTCTCCGACGGCACCACTCTCCCCACCGGTGTCGGAAACGGCACTGTTTTTGCTGGATACCCCATGACTGATCTCAAGACCGCCGTGGAAACCGCCGGCGACTTGACCCAGATGCAGGTTCAGGTGGACCTCGTCGGAACCGTGTTTGGGGTGGCGGCGCCGAGTGTTCCTATGCCCTCTTCCATCAGCCTCGCCAATGATGGTTTCATCTGTCGCAAATCCACCACCCAAGGGAAGAATGCGAGTAGTGTGTGTTGCACGAGAGATCCCAAGTTCAAAACAAACATAACGACAGATGAAAAGTTTTTGCCACGTCAGAATGGTGATCTTACCATTATGTATGATGTGATCAGAACCTATGATTCCAATTATTGGGCTGAGGTTACCATTGCAAACCATAACCTGCTTGGCAGGCTTGACAATTGGAGGTTGAGTTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCCGCAGTTGTGGATGCTTCTGATTGTGTCTTTGGTAAGCAAGGTACATTCTACAAGGATCTTGACTTTGCCAATGTGTTGAATTGTGAAAGAAGGCCAACTATTATTGATCTCCCTCCCACCAAGTTCAATGATACGGATCTTGGGAGGATCCCCTTTTGCTGTCGCAATGGTACTATATTGCCACCATCGATGGACCCTAGCATGTCTGCTTCCAAATTCCAAATGCAGGTCTTCAAAATGCCGCCATCACTTAATCGGTCCCAGCTTTCTCCGCCACAGAACTGGAAGATAAATGGTACCCTCAACCCTGACTACAAATGTGGCCCTCCTGTCCGGGTCAGTCCCAGTGAAAATCCAGATCCATCAGGCTTACCGTCGAACAAAACTGTAATGGCCAGTTGGCAGGTTGTGTGCAACATAACAACAGCCAAGGGAACACCAAGCAAATGCTGTGTCTCGTTTTCAGCCTATTACAATGATTCAGTTATTCCTTGCAAAACGTGTGCTTGTGGATGCCCCAAGAATACAGAAAGAACATGTAGTACCACTGCTCCAGCTATGTGGCTTCCACCAGAGGCACTCCTTGTTCCTTTTGAGAACCGAACTGCCAAGGCTGTTGCTTGGGCTAGTCTGAAACATTTGCGGGTGCCAAACCCGATGCCCTGTAGCGATAACTGTGGTGTGAGCATTAACTGGCATTTATACACAGACTACACTAAAGGATGGAGTGCAAGGGTCACACTTTTTAATTGGGGTGAGACTAACTTTGCAGACTGGTTTGCTGCAGTGCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAAGTACCCTAGAATTAAATGGCGTAAACAATACAATAATTATGCAAGGTTTGCCGGGTTTGAACTATCTCGTAGCAGAAAGAGATGGAGATGACCCTCTGAGAGATCCTAGGGTGCCTGGTAAACAACAGTCAGTAATCTCATTCACAAAGAAAACTACACCCGGAATCAATGTAGCTGGTGGAGATGGGTTTCCAACCAAAGTGTTTTTCAATGGGGAGGAATGCTCTCTTCCTTCAGTGTATCCAAGCAGTGGTTTCAGGAAGGGTTTTTCATGGTCTACTTCCATGCTTTTAACACTGTTTCTGATCGTCTTGATGCGGTGA 1947 0.4813 MKMLWPLSTHSCCISIAILTIFFATTSFSDAQTCNGILLSYAYAGGTRLPPNVSDPAKQPYRFESTLTVLNNGLDELKSWKVFVGFDHDEWLVSASNAVLSDGTTLPTGVGNGTVFAGYPMTDLKTAVETAGDLTQMQVQVDLVGTVFGVAAPSVPMPSSISLANDGFICRKSTTQGKNASSVCCTRDPKFKTNITTDEKFLPRQNGDLTIMYDVIRTYDSNYWAEVTIANHNLLGRLDNWRLSWDWMNDEFIYSMKGAYPAVVDASDCVFGKQGTFYKDLDFANVLNCERRPTIIDLPPTKFNDTDLGRIPFCCRNGTILPPSMDPSMSASKFQMQVFKMPPSLNRSQLSPPQNWKINGTLNPDYKCGPPVRVSPSENPDPSGLPSNKTVMASWQVVCNITTAKGTPSKCCVSFSAYYNDSVIPCKTCACGCPKNTERTCSTTAPAMWLPPEALLVPFENRTAKAVAWASLKHLRVPNPMPCSDNCGVSINWHLYTDYTKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNASTLELNGVNNTIIMQGLPGLNYLVAERDGDDPLRDPRVPGKQQSVISFTKKTTPGINVAGGDGFPTKVFFNGEECSLPSVYPSSGFRKGFSWSTSMLLTLFLIVLMR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2281 648 PANTHER COBRA-LIKE PROTEIN 7 12 647 - -
Apr9g2281 648 MobiDBLite consensus disorder prediction 369 388 - -
Apr9g2281 648 Pfam COBRA-like protein 223 402 IPR006918 GO:0010215|GO:0031225
Apr9g2281 648 PANTHER COBRA-LIKE PROTEIN 7 12 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2281 Apr-Chr9 30541932 30544992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2281 34 632 COBRA Gene Family AT4G16120 70.100 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2281 - - gmx:100803929 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2281 9 30541932 30544992 Apr9g2281 9 30541932 30544992 ECH
Apr9g2281 9 30541932 30544992 Apr1g2101 1 30548766 30551688 PCT