Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2269 ATGGGACAAGAATCAGATTCCAAGAGCAAGTTGGTATTAGAGATTTGCTCCATTTCTACACGTTCTGTGGTATGTGTTCATAGACTTCTCTCAAACCCATCCAAGGCAACTTTCGTTGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGCGGTGAATGCCATTCGCAAGCGGTACCATAAACTGGCTTTGCAAGTTCATCCAGATAAGAATAAACATCCCAAGGCTGAAATTGCTTTCAAGCTTGTTTCTGAGGCGTATACATGTCTATCTAATGCAGCAAAGAGAAAGGCCTTTGACTTGGAGAGATATAAGCGTTTCTGCTTCGAGTGCAAAAGAATTCCGTATACATCTAGCAATGCCCCGGGCAATTCAAGTGGTTTAAGCTTCAAGGCATGGGATTTTATCAGAAGATCAAGATCTTTTAAACTTTGGAGAAATATTAGGGACATGAGAGAGAGGTTCAAAGACGAGGCTAAGGTGATAGAGAATTGCTTGCGAACAAATTCAATGTCAAGGGAAGAATCTCCACTCTATAATCCTGTTGGCTTTCTACACAGAAGCAAGTCAGTGCATAGATTTGAGAAAGAAACGCCAATTTTCAATCCATCGGATTACTTGTATCAAGGCTACCCTCATGTGAGGAGTAATATTTACAAGAATTCTTCGACATTTTGGTATCTGCAGAGAAATAATATGCTGCACAATGACGTGGGAGGAGTGCACCATGCCTCTCCTGTTTTTGAAGTCAAATCAAGAAGTATGTTTGCTAGTAAATTCGCTTTTGTCCCATCAAAATGTTAG 807 0.4052 MGQESDSKSKLVLEICSISTRSVVCVHRLLSNPSKATFVDWYCILGVEENAAVNAIRKRYHKLALQVHPDKNKHPKAEIAFKLVSEAYTCLSNAAKRKAFDLERYKRFCFECKRIPYTSSNAPGNSSGLSFKAWDFIRRSRSFKLWRNIRDMRERFKDEAKVIENCLRTNSMSREESPLYNPVGFLHRSKSVHRFEKETPIFNPSDYLYQGYPHVRSNIYKNSSTFWYLQRNNMLHNDVGGVHHASPVFEVKSRSMFASKFAFVPSKC* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2269 268 CDD DnaJ 40 93 IPR001623 -
Apr9g2269 268 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Apr9g2269 268 SUPERFAMILY Chaperone J-domain 31 104 IPR036869 -
Apr9g2269 268 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 255 - -
Apr9g2269 268 PANTHER BNAC03G44070D PROTEIN 4 255 - -
Apr9g2269 268 Pfam DnaJ domain 40 101 IPR001623 -
Apr9g2269 268 Gene3D DnaJ domain 39 161 IPR036869 -
Apr9g2269 268 SMART dnaj_3 39 96 IPR001623 -
Apr9g2269 268 PRINTS DnaJ domain signature 42 60 IPR001623 -
Apr9g2269 268 PRINTS DnaJ domain signature 60 75 IPR001623 -
Apr9g2269 268 PRINTS DnaJ domain signature 76 96 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2269 Apr-Chr9 30463245 30464517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2269 40 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 2.21e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2269 - - gmx:100801809 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2269 9 30463245 30464517 Apr9g2269 9 30463245 30464517 ECH
Apr9g2269 9 30463245 30464517 Apr1g2116 1 30637077 30638709 PCT