Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2266 ATGGTTCTTTTTCCTTCTTTTGTCAACGGATTGGCGAGAAGTGTGTCAATCAAGAAAGAGAAGAGATGTCAAAAGGATGATGAATGGAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAGGAAGAATGAATTGCTATTGCTTTCATCTGGAGTTATTAAGTCCCCTAAGGCCGATAGTTTTGTTTCTGTGTTCACTAATAGGGGCCAGAAAGGAGTCAACCAGGATCGTCTTGTTGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTCTGCGGAATTTTTGATGGACATGGCCCTTGGGGACACTTTGTTGCCAAAAGGGTCAGAAAGCTTGTGCCAGCCTTTTTGCTCTGCAATTGGCAAGAAAATCTGGCTGCAACATCACTTGACCTGGATTTCAAAATGGAGGGGGACAAAAGTATCCATGGATTGAACTTATGGAAGCAATCCTATATAAAGACTTGTGCTGCCGTGGATCAGGATCTGAAGCAACACACTGGGATTGATTCCTTCCAAAGTGGCACTACAGCTTTGACAATCATCAAACAGGGTGAGGATCTGATTATAGCAAATGTAGGTGATTCTAGGGCTGTGTTGGCAACCACTTCAGAGGATGGCAAATTAACTCCACATCAGCTTACCACTGACTTCAAGCCAAATTTACCACAGGAAGCAGAGCGCATAACACAATCCAGAGGACTGGTATTTTCTTTGGAAGATGAACCAGGAGTATACAGGGTCTGGATGCCAAACGCTAAAACTCCAGGACTAGCAATATCTAGAGCTTTTGGTGACTACTGTGTGAAGGACTTTGGACTAATATCTGTGCCAGATGTGACACACAGAAAGCTTATCACTAGGGATCAATTTGTCATCGTGGCAACAGATGGGGTATGGGATGTTATATCCAACCAAGAAGCAGTGAAGATTGTTTCTGCAACGCCACATAAAGAAAAGGCAGCTCAAAGGCTCGTGAAATGTGCTATACATGAATGGAAACGGAAGAAAAGTGGCATTGCTATGGATGATATGTCAGCTATTTGCATTTTTTTAAATTGTTCCCCCTCTCATCAACTCCCAATCACCAAAGCAGTTAAGAATGCTGCATGA 1113 0.4295 MVLFPSFVNGLARSVSIKKEKRCQKDDEWKAVEELAKEARKNELLLLSSGVIKSPKADSFVSVFTNRGQKGVNQDRLVVWEEFGCQQDMMFCGIFDGHGPWGHFVAKRVRKLVPAFLLCNWQENLAATSLDLDFKMEGDKSIHGLNLWKQSYIKTCAAVDQDLKQHTGIDSFQSGTTALTIIKQGEDLIIANVGDSRAVLATTSEDGKLTPHQLTTDFKPNLPQEAERITQSRGLVFSLEDEPGVYRVWMPNAKTPGLAISRAFGDYCVKDFGLISVPDVTHRKLITRDQFVIVATDGVWDVISNQEAVKIVSATPHKEKAAQRLVKCAIHEWKRKKSGIAMDDMSAICIFLNCSPSHQLPITKAVKNAA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2266 370 PANTHER ALPHABET, ISOFORM E-RELATED 1 364 - -
Apr9g2266 370 Gene3D - 50 354 IPR036457 -
Apr9g2266 370 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Apr9g2266 370 SUPERFAMILY PP2C-like 57 353 IPR036457 -
Apr9g2266 370 CDD PP2Cc 60 352 IPR001932 -
Apr9g2266 370 SMART PP2C_4 48 350 IPR001932 -
Apr9g2266 370 Pfam Protein phosphatase 2C 86 331 IPR001932 -
Apr9g2266 370 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2266 Apr-Chr9 30446484 30449617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2266 1 353 PP2C-type Phosphatase Gene Family AT3G05640 58.873 1.11e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2266 - - gmx:100814087 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2266 9 30446484 30449617 Apr9g2266 9 30446484 30449617 ECH