Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2263 ATGAATTCCAACTACGGCAAATCAAACGCACAGAAAGGTTCCTCTGTTTCTCTGAACAACTTCAACTTCGATTTTGATATCGGCATCGGATCCAATCGTCCCAAATCCCTAAACGATCAGAAAAACCCCAATCCCTCCTATTCTTATTCAACCAAAACCACAACCACTTCATATTCTTCTACGCAACCCAACAAACCGTCATGGACCCACCAACCCGCTCCGACTCAGACCGCGTTACCGGGTGGACCCCCTTCCATGGTTGGGGATATCTTCGGCAAGAGTTGGGGATCTACATCCACTCAAACTTCGGGTTCCAACATTGGGATCGTTAATAAGAACCCTAATCTTTTTGGAGATTTGGTGAGCTCTGCTTTTGGCCAGGGTTCCAAGACTGCTTCTACCAACGTTCCTTTGAAAAATGCTACCAAGGTATCAGCTCCCACACCCAACAACAAGTCCTCATTTTCCATGGCAAACATGGCGGATTCTTTGCCTAAAACTGGCTCCACACCACAGAGCAGTGCTAGTTGGGCATCTTCTGGGACTTTTAGTATGAATAACAATGAAACCCCTAATTCTGGGGGTCCTTCAATGCGGAGTATGGGTACTGCTGCTGCACCGGCAACTGCAACTGCAACTGGAAGTGGGATCAGTTCTAATAACAATGATCCGTTTAGTTCTCTGGCTGGTATTGGATCCAAACAATCTGCCAGTCTTAATTCTGCTGCTAAAGTCCAAAAGGTTGAATTGGGGGATGATGGTTTTGGAGATTTTCAGAATGCTTCCAAACCTAGCTCTGCCGCATTTCCATCTGGTGGTTCTGGGGGAATTGACATTGATTTTACTGGATCTGCCACTTCAAATCAGACCCCTGTCCAGCAGCCATCGGGTGGTGATCCAATGGACATGTTTTTCACATCTTCCTCCGCCTCTGCCGGAGCTCATCCCTCTTCGGAAATGGATGATTGGGGTTTGGATTCTGAATTTGGCGGGGGAGGTGATGTAGGTGGCGCAACTACTGAGCTTGAGGGGCTTCCTCCTCCTCCTGCTGGCGTATCAGGTTCCACTGCCAAAGGCAAGGGGATGGACAATTACAAGCAGGGACAGTTTGCTGATGCTATTAAGTGGCTTTCATGGGCTGTCATCCTTCTAGAGAAAGTGGGGGATAGTGTAGGCACAGTGGAGGTTTTGTCGTGCAGGGCTTCGTGTTACAAAGAAGTTGGGGAGTATAAAAAGGCCGTGGCAGATTGTACAAAGGTTCTTGAAAATGATGAAACCAATGTATCTGTCCTGGTACAGCGTGCTCTCTTGTACGAGAGTATGGAAAAGTACAAACTTGGGGCTGAAGACCTTAGGACTGTGCTGAAGATTGATCCTGGCAATAGGATTGCTAGAAGCACCGTTCACCGGTTGGCTAAGATGGCCGAGTAG 1431 0.478 MNSNYGKSNAQKGSSVSLNNFNFDFDIGIGSNRPKSLNDQKNPNPSYSYSTKTTTTSYSSTQPNKPSWTHQPAPTQTALPGGPPSMVGDIFGKSWGSTSTQTSGSNIGIVNKNPNLFGDLVSSAFGQGSKTASTNVPLKNATKVSAPTPNNKSSFSMANMADSLPKTGSTPQSSASWASSGTFSMNNNETPNSGGPSMRSMGTAAAPATATATGSGISSNNNDPFSSLAGIGSKQSASLNSAAKVQKVELGDDGFGDFQNASKPSSAAFPSGGSGGIDIDFTGSATSNQTPVQQPSGGDPMDMFFTSSSASAGAHPSSEMDDWGLDSEFGGGGDVGGATTELEGLPPPPAGVSGSTAKGKGMDNYKQGQFADAIKWLSWAVILLEKVGDSVGTVEVLSCRASCYKEVGEYKKAVADCTKVLENDETNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPGNRIARSTVHRLAKMAE* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2263 476 Pfam Tetratricopeptide repeat 429 460 IPR019734 GO:0005515
Apr9g2263 476 MobiDBLite consensus disorder prediction 280 300 - -
Apr9g2263 476 SMART tpr_5 354 387 IPR019734 GO:0005515
Apr9g2263 476 SMART tpr_5 394 427 IPR019734 GO:0005515
Apr9g2263 476 SMART tpr_5 428 461 IPR019734 GO:0005515
Apr9g2263 476 MobiDBLite consensus disorder prediction 129 220 - -
Apr9g2263 476 MobiDBLite consensus disorder prediction 29 82 - -
Apr9g2263 476 Gene3D Tetratricopeptide repeat domain 354 475 IPR011990 GO:0005515
Apr9g2263 476 MobiDBLite consensus disorder prediction 256 300 - -
Apr9g2263 476 MobiDBLite consensus disorder prediction 33 76 - -
Apr9g2263 476 SUPERFAMILY TPR-like 358 466 IPR011990 GO:0005515
Apr9g2263 476 PANTHER OS03G0340700 PROTEIN 1 476 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2263 369 476 Calmodulin-binding Proteins AT3G25230 32.143 4.13e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2263 - - pvu:PHAVU_003G107800g 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2263 9 30428181 30432455 Apr9g2263 9 30428181 30432455 ECH