Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2259 ATGGCAGAAGGATTCGATACCGTCCACGAGAGGAAGAAGAAGCTAGCCATTCTTAGCATCTCTTCGATCCTGCTTGTGGCTATGGTCGCCGCAGTGGCCGTGGGCATAAGAACCGACGGCGAACTTAGCGAAGAAGGGGGTGATGGACAGATCGCAAAGTCTCAAAAGAACGTTCAGGTTATATGCGAATCCACCGAATTCAAAGAAACATGCCATAAGAGTCTTGAAAAGGCATCAAACGAAACCACAGACTTTAAGGGGCTTATCATAGCCGCGTTCAACGCCACGGCAGAGGAAATGGTAAAGCAAATTGAAAACTCCACCCTCTACCACGAATTGGCCACCGACAACATGACCAAACAGGCCATGGATATTTGCAAGGAGGTTCTAGGTTACGCTGTCGAAGATATTCACAGATCCGTTCACATGTTGGACAGGTTTGATATTAACAAGATGGATGAGTACGCTTATGATCTCAAGGTTTGGCTCGCGGGTACACTCGCTCACCAACACACATGTTTGGATGGGTTTGTGAACACAACCACCGATGCTGGCCAGACAATGGCTAAGGTTCTGAATGCCTCTTTGGAGCTCAGCAGCAACGCGTTGGACATAGTGAACGGCGTGTCTAGTCTCTTCAGGGGTCTTAACTTGACCGCCTTTACTACCACCACCAGTACTAGAAAGCTTCTGTCTGAAGCACCTTTGGCTGATGGTTTCCCTTCATGGTTGAGTGAAGGGCAAAGGCGTCTTCTCCAAGATCCCGAGCCTAAACCCAATGTTGTTGTGGCTCAGGATGGGAGTGGCCAAGTCACCACACTCACCGAGGCTCTTAAACTCGTTCCTAAGAAGAACAAAAAGCCTTTTGTTATTTACGTGAAGGCTGGTATCTACCAGGAGTATGTTAACGTGGAGAATCGCATGAGCCATGTCACTGTTATTGGAGATGGCCCCACCAAGACAAGATTCACCGGCAGCAAAAACTACGTCGATGGTATCCAAACTTACGGCACTGCCACCGTCGGTGTCAATGGTGCTTACTTCATGGCCAAAAACGTGGGATTCGAGAACACCGCTGGAGCTGAGAAGCACCAAGCCGTGGCACTCAGGGTAACAGCAGACAAGGCTGTGTTCTTCAACTGCGCAATGGACGGGTTCCAGGACACCCTCTACGTGCAATCACACAGGCAATTCTACCGTGACTGCACTGTTACAGGTACCATTGATTTCGTTTTCGGTGATGCGGTTGGAGTGTTCCAGAACTGCAAGTTTATCGTGAGGAAGCCATTGGACAACCAGCAATGCATGGTGACAGCTGGTGGAAGGGCAAAGATTGATAGCACTAGTGCACTTGTTTTCCAGAGCTGTGTCTTCACGGGTGAACCAGATTTGTTTGCCTTGCCCCGCAAGATATCGTACCTTGGAAGACCATGGAGGATGTACGCCAAGGTTGTGATCATGGACTCTCAAATTGACGACATATTTGTTCCACAAGGGTACATGGCATGGATGGGAAGTGCGAACAAGGACACAAGCGTCTACTACGAGTTCAACAACAAGGGTCCTGGTGCTAACACTGCTGAGAGAATCACGTGGCCTGGTTTCAAGGTGATTAACCCTGTTGAGGCTGCTGATTACTACCCAGGGAAGTTTTTTGAGATCGCTAATTCAGTTCAGCGTGATAGTTGGATCATTGATTCTGGAGTACCCTATTCCCTTGGACCCCTTGCCCCCGTCGCAGCTTAA 1746 0.4908 MAEGFDTVHERKKKLAILSISSILLVAMVAAVAVGIRTDGELSEEGGDGQIAKSQKNVQVICESTEFKETCHKSLEKASNETTDFKGLIIAAFNATAEEMVKQIENSTLYHELATDNMTKQAMDICKEVLGYAVEDIHRSVHMLDRFDINKMDEYAYDLKVWLAGTLAHQHTCLDGFVNTTTDAGQTMAKVLNASLELSSNALDIVNGVSSLFRGLNLTAFTTTTSTRKLLSEAPLADGFPSWLSEGQRRLLQDPEPKPNVVVAQDGSGQVTTLTEALKLVPKKNKKPFVIYVKAGIYQEYVNVENRMSHVTVIGDGPTKTRFTGSKNYVDGIQTYGTATVGVNGAYFMAKNVGFENTAGAEKHQAVALRVTADKAVFFNCAMDGFQDTLYVQSHRQFYRDCTVTGTIDFVFGDAVGVFQNCKFIVRKPLDNQQCMVTAGGRAKIDSTSALVFQSCVFTGEPDLFALPRKISYLGRPWRMYAKVVIMDSQIDDIFVPQGYMAWMGSANKDTSVYYEFNNKGPGANTAERITWPGFKVINPVEAADYYPGKFFEIANSVQRDSWIIDSGVPYSLGPLAPVAA* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2259 581 PANTHER PECTINESTERASE 8 577 - -
Apr9g2259 581 SMART PMEI_2 53 205 IPR006501 GO:0004857
Apr9g2259 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Apr9g2259 581 Pfam Plant invertase/pectin methylesterase inhibitor 57 205 IPR006501 GO:0004857
Apr9g2259 581 ProSitePatterns Pectinesterase signature 2. 404 413 IPR033131 -
Apr9g2259 581 CDD PMEI-like_3 61 211 - -
Apr9g2259 581 Pfam Pectinesterase 260 551 IPR000070 GO:0030599|GO:0042545
Apr9g2259 581 ProSitePatterns Pectinesterase signature 1. 285 304 IPR018040 -
Apr9g2259 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 209 IPR035513 -
Apr9g2259 581 PANTHER PECTINESTERASE 8 577 - -
Apr9g2259 581 TIGRFAM PME_inhib: pectinesterase inhibitor domain 52 208 IPR006501 GO:0004857
Apr9g2259 581 SUPERFAMILY Pectin lyase-like 257 552 IPR011050 -
Apr9g2259 581 Gene3D - 258 576 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2259 Apr-Chr9 30411009 30412754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2259 1 581 Carbohydrate Esterase AT3G05610 44.218 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2259 K01051 - gmx:100820068 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2259 9 30411009 30412754 Apr9g2259 9 30411009 30412754 ECH
Apr9g2259 9 30411009 30412754 Apr1g2126 1 30787035 30789162 PCT