Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2243 ATGGAAGACCCTCAGTACCCCGAACATTCTAAAACCAAAATCACAGTTCAGCCATCGCAACACTCCGATAACGATCGAAGCACCACGGAGTTGCGCGCCCTAGATTGCAACCTCGCTTCCCTTTGTGAACATGTTCAAATCGAAGGGTTCAACTCCGGTTCCTTCTCCGATATTGTTGTCAATGCAATGGGTTCCACTTATCAACTCCATCGTCTTATCCTCTCCCGCAGTTCATATTTCAGGAATATGCTTCATGGACCTTGGAAAGAAGCCAGTGCTCCTGTTGTGACTCTGCATGTTGATGATAAGAATGTTAATGATGAAGCAATTGCAATGTCTTTGGCATATCTATATGGGCATCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTTCAGGATTTATGTGCAATATGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCATATCAGGTGTTTGCGGAGAACCAAGACTATGGCATTCACGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTATCTTTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTACATGCATTACTGACTTCTAATGATCTGTGGATACTCAATGAAGAGAAACGGTTTGAGTTGGCTTTGCACACATTCGTGGCAAAAAATGCTCATTGCAAGGTTGAACATCCTGCACAAGGAATTACTGGTTCTGAGTCTGCAACCAGTATTCATTCTGATTCTGGTGGCACTAAGGGAAAAGGTGTAACTGATAGCTGTACTAATAAGAGGCTAGAAACTGACATGGGGAAAATGAGTCTTAAAGGTGATCTAAAGGACACTAGCACCCCTAATATTCTAGTTGAGCTTGCAGACTCAGTGGCAGACTTCAACAATGGAGTTTCTGATTCCAATGAACAGGTTCAACAAGCTTCATACGTCAGTTCACCAAACCTAAATCCCAAATATCCTTGTGATGTGGAAGGGCCTTCATTGGGCAGTTCATCGTCTGATACAGATGGGACGAGAACATCATGTTATGTTGAGATGCCTCTTGGCACTGGAGCATCTGGAATGGGCATTGAAGGGCCATCTGAAGAAGGATCTTGCTACCATTTGGATAACGGTAGTTGGCTAGTTAGGGATCAATCAAGACATTGCTTTTCATCAAATTCCTGTAATGAGCTCACTTCCAGTGATTGGGGAAGATATGGAACACCTTTGTTTTCATGGAATGGCCAGGCCGTTGGAAGAAGACAGCTTAAAGCACACCCTAGAGGAAACTACAGAGGTCATGGGGATGAATATGATGCGTTCTTGAATATATTTGAAGGAGGTTCCCTTTTATATTGCAATATGTCTTTTGATGCACTTCTAAATGTCAGAAAGCAGCTTGAAGAGTTGGGTTTTCCTTGCAAAGCTGTGAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCTGAAACATGCAAAGTTTGTTCCCTTATGAGTATGGCTTGCACTTGCCAGAAACAATTTGCATTTACACATGGACCTACTACCAATGGCTCTTATATGCAAGAACATAATCAGAACAATATGCCTGGGAATTTGGGCAATATATATGTTGCTGAATCTTCTCCAGGTGAAAGAAATGGCCTTTTTAGACCTGTACGGGTGCATGTTAGGGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACCACATTTGTTCCAGCATCTGCTTCACCTCCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGAAACTATCCTCAGTCTGCAGCCAATGATGACTCAGAGACACGTGCTGACCACAATGGAGACCTGTCAGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGCCAGGGAGGGAGTAACGGAACAAATGTACAAACAGAGCTGACCCAAAGGGGATATGAAATGGGTTTGCAAAGCAGCATGTCCGGAACAACTGCTGGAGGTGCAAGTACTGGTGGCATCCCCATGCAGATGTTAGAGACACCAGAGCATACCATTGGTATAGAATGGGATAATGTCAACAATTCTTCTATATCACTGGATTTGAAAACACCTTTAAGTCATTTCCCCCCTTTTCGCTTTGGTGTGCGTTTTGAGGATGTGCATAGGCTCGGCGATGGTCAGGTCAAGCATTCTCCCGAAGTTTTCTATGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAGGACCCACAGGGACGGCGTACCCTTGGGTTGTTTCTTCACCGTCGGAAGGCAGAGATAACAGATATACATAGAAAGGTACACATGTATGTTGACTCTCGTGAAAAGGTGACGGCACGCTACCAGTTGACTGTCCCATCCAAGAGGGATTTGATGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCTAAGGGATGGGGCTGGCGAACTGCTCTGCTATTTGATGAACTTGCTGATCTTCTCCAAAACGGCGCCCTAAGGGTCATTGCTGTAGTGCAGCTTGTTTGA 2595 0.4428 MEDPQYPEHSKTKITVQPSQHSDNDRSTTELRALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYQLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAIAMSLAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWILNEEKRFELALHTFVAKNAHCKVEHPAQGITGSESATSIHSDSGGTKGKGVTDSCTNKRLETDMGKMSLKGDLKDTSTPNILVELADSVADFNNGVSDSNEQVQQASYVSSPNLNPKYPCDVEGPSLGSSSSDTDGTRTSCYVEMPLGTGASGMGIEGPSEEGSCYHLDNGSWLVRDQSRHCFSSNSCNELTSSDWGRYGTPLFSWNGQAVGRRQLKAHPRGNYRGHGDEYDAFLNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAAETCKVCSLMSMACTCQKQFAFTHGPTTNGSYMQEHNQNNMPGNLGNIYVAESSPGERNGLFRPVRVHVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFGVGNRNYPQSAANDDSETRADHNGDLSGDGLTALVGLSQGGSNGTNVQTELTQRGYEMGLQSSMSGTTAGGASTGGIPMQMLETPEHTIGIEWDNVNNSSISLDLKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLTVPSKRDLMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2243 864 MobiDBLite consensus disorder prediction 248 277 - -
Apr9g2243 864 Pfam BTB/POZ domain 50 154 IPR000210 GO:0005515
Apr9g2243 864 SMART BTB_4 56 156 IPR000210 GO:0005515
Apr9g2243 864 MobiDBLite consensus disorder prediction 616 636 - -
Apr9g2243 864 SUPERFAMILY POZ domain 50 154 IPR011333 -
Apr9g2243 864 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 9 864 - -
Apr9g2243 864 Gene3D Potassium Channel Kv1.1; Chain A 24 189 IPR011333 -
Apr9g2243 864 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 9 864 - -
Apr9g2243 864 MobiDBLite consensus disorder prediction 1 27 - -
Apr9g2243 864 MobiDBLite consensus disorder prediction 249 272 - -
Apr9g2243 864 MobiDBLite consensus disorder prediction 10 24 - -
Apr9g2243 864 ProSiteProfiles BTB domain profile. 56 126 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Apr9g2243 BTB 1.2e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2243 - - gmx:100806711 1580.07