Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2235 ATGGATTTCTTTATACAGGAGATAAACATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAATAGTGATAGAAGTATTCCTCGTGAGGTTTCCAATGGCTACAGAATCCTACCTGGAGTCCGTAGAACAAGTAGTTTCTCTTGCTTGTCAGGGGCAGCCTTAAGTGCAAATGCTACACTAGCCAACACAAACATATGCAATGGTAAGATAGGAGAAGAAATCCTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAGGTAACCTCTTCGCCAAGTCTTTCAAAGTTGGACATACTATCATCTTCCCTCCCAAATAGTTTGTCTTACCTAAGCTGCAGTCCTTCTACGCCAAGTGATATCCTTGAACATGACTCTTGCATGATAAAATCTGCAAGCGATCCTTCTAGAAGTGAATGTTTTCTTAATGCTAAGGAAGTTCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGATGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGAAGAGATGCGGCTGACTTTCTGGCTGGTACCCTGTACGACACCATCATATCTTACTTTAACAAGTTAATTTGGGAGATGGATCTGGGTTCCATAGAAGTTTCTAATGATGAGGGTTTAGGTGGATCCCTGCAATATGATCCATCTACTGAGTCAAAAGCATCATGTGAGTCGTTTTCACATGGAGTACTTGATATCCTGCAACGTGCTGTTAGTCAGGCTGAGAATGATTTCTTGAGCATGGTTGAGCAGGAAATGGAAGAACGTCCTGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTAGGTGACAGTAGAGCAGTATTGGCAAAATGCAGTACAGATGATGGAATAAATAAGAGTGAGAAACTTGAGGCTATACAGCTTACGGATAATCATAGTGTTGAAAATAAAGCTGAAAGAGCTAGACTTTTGGCTGAGCATCCTGATGATCCCAAGGTTATTATAGCAGGAAAAGTGAAAGGGAAACTGAAGGTTACTCGTGCTTTCGGAGTTGGCTACTTGAAAAAGAAAAATTTGAATGATGCTTTGATGGGAATCCTTAGAGTTCGTGACCTTACTAGCCCACCATACGTATCCACTGAACCATCATTGAATGTCCATAAAATCTCACATTCTGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGACGAGGCAGTAAAGCTTGTAGAATCTTATATCTTGAACAATTCTCTGGGGGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCAAAATCTGCGGGATTCAGCATGGAAGAGTTGATGAATGTTCCTGCTGGAAGGAGAAGGAAGTACCATGATGATGTGACCGTAATTGTGATCATGCTTGGGATCAATCAACGGACTTCAAAGGCATCCACTGGCATCTAA 1509 0.4042 MDFFIQEINMLSPEGELKISFGYKCNSDRSIPREVSNGYRILPGVRRTSSFSCLSGAALSANATLANTNICNGKIGEEILPSWDSPNSFRKVTSSPSLSKLDILSSSLPNSLSYLSCSPSTPSDILEHDSCMIKSASDPSRSECFLNAKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNKLIWEMDLGSIEVSNDEGLGGSLQYDPSTESKASCESFSHGVLDILQRAVSQAENDFLSMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLAKCSTDDGINKSEKLEAIQLTDNHSVENKAERARLLAEHPDDPKVIIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYVSTEPSLNVHKISHSDQFVIVGSDGLFDFFSNDEAVKLVESYILNNSLGDPAKFLIEQLVARAAKSAGFSMEELMNVPAGRRRKYHDDVTVIVIMLGINQRTSKASTGI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2235 502 CDD PP2Cc 158 487 IPR001932 -
Apr9g2235 502 SMART PP2C_4 144 487 IPR001932 -
Apr9g2235 502 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 8 215 - -
Apr9g2235 502 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 226 501 - -
Apr9g2235 502 SUPERFAMILY PP2C-like 159 489 IPR036457 -
Apr9g2235 502 Pfam Protein phosphatase 2C 240 457 IPR001932 -
Apr9g2235 502 PANTHER PROTEIN PHOSPHATASE 2C 226 501 IPR015655 GO:0004722|GO:0006470
Apr9g2235 502 PANTHER PROTEIN PHOSPHATASE 2C 8 215 IPR015655 GO:0004722|GO:0006470
Apr9g2235 502 ProSiteProfiles PPM-type phosphatase domain profile. 145 489 IPR001932 -
Apr9g2235 502 Gene3D - 117 497 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2235 Apr-Chr9 30225437 30229629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2235 13 500 PP2C-type Phosphatase Gene Family AT3G16560 65.587 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2235 - - gmx:100808304 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2235 9 30225437 30229629 Apr1g2155 1 31025323 31029026 PCT